Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01579 ATGTCCACCTTTTCTAGTTCGGTGAAGTGGATTCGCAAGGAATACGCAAACACGCCACCACTCTCAACACCGGGTGGTGGCTGCTGCTGCTGCTGCCTTTTCGATGTCCTATGGAAACTGGTCGCTGTCTTAGTTATTCTCATCGTCTTGGCTTTAATTATCTTCTCTCTGTTCAGATTTTACGTGACGGATGCATCGCTCACTCAGTTCGACTACAGCAGCCTCAACAATACACTCAATTATCAACTGGCTTTCAACATCACTAGCCGTAACCCCAACAGAAAGCTCGGCTTGTACTATGACAGAATCGATGTCGACCTATACTACCTGGACGAGAGGGTGACATCTCAGTACTTAGGAACCTGGCCTGTGACCGGAGCACTTCAACCCACAAAAACTTCAAATTCATTAAAAGTTGTCTTCAAAGGGCCTCAGTTTGTTGTCCTGGATGCTGATGAGCAAGCTGCCAACAGCAATGACAGGAATGCAGGGGTATACCCCATTGATTTGAAATTCCGGTTCCATATGAGATACAGGCTGGGTGATTTGATCGGTGACACGTTCAAACCAAAAGCCTATTGTGATTTGAAGATTCCATTGAGTGCCAATGATGGGAAGTTTGCAGTATTAATTATTTCAGCCCGCGAGATGTAA 654 0.4572 MSTFSSSVKWIRKEYANTPPLSTPGGGCCCCCLFDVLWKLVAVLVILIVLALIIFSLFRFYVTDASLTQFDYSSLNNTLNYQLAFNITSRNPNRKLGLYYDRIDVDLYYLDERVTSQYLGTWPVTGALQPTKTSNSLKVVFKGPQFVVLDADEQAANSNDRNAGVYPIDLKFRFHMRYRLGDLIGDTFKPKAYCDLKIPLSANDGKFAVLIISAREM* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01579 217 PANTHER OS05G0367900 PROTEIN 28 200 IPR044839 GO:0098542
Pte15g01579 217 Pfam Late embryogenesis abundant protein 86 188 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01579 Pte-Chr15 13390263 13392294 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01579 59 201 SNARE and Associated Proteins AT1G32270 35.664 7.52e-23 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01579 - - gmx:100795302 150.984