Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01567 ATGATCATGGGGAGAGGCAGAACACCATGCTGTGACAAGTCTCAAGTGAAAAGGGGTCCTTGGAGTCCTTCTGAAGACTTGAAGCTCATCACCTTTGTTCAGAAACATGGCCATCTTAACTGGAGAGCTCTACCCAAACAAGCAGGACTTTATAGATGTGGGAAAAGTTGTCGCTTAAGATGGGTTAATTATCTAAGGCCAGATTTGAAACGAGGGGATTTTACGAAAGAGGAAGAGGAGACAATTATTAGGATGCATGCAGAACTTGGAAACAAATGGTCAAAGATTGCATCCCAATTGCCTGGAAGAACTGATAATGACATCAAGAATATGTGGAACACCCACTTGAAGAAAAGAGTGCAGGCTTCAACAACTACAGAATCTGGTAGAGATGAGTCCAAGGGATCCTCCTTAACCTCATCATCTTTGTCTACTGCTGACACAAGTGACTTGAAAAGTAAGAACAAAAGCAGTCCCAGTCATCAAATGAAAGGACAAGTCTCCACTGAAACAGGACAAGACGCTGCTGGGCAAGATTCACTGGAACAAGTCTCGGATGAAAATGTAGAGACAGTTGTAGAACTTAAGGAGTTGTCAAGTTCAGTATCTTCTCATTTTGATGTCACCGACATTAGCCTGTTTGAAAATTACAGATCACTGCAACAAATAACACCAAAAGTAAGTGGTGGGGGTCCTTACTTCATGAACAAGGCATCAGAAGAGGTGAACAAACCAGATATCTCAGAAACCAAGAATGTCAAGGAACAACCTTTGGAGGTAGATTTGGATTTTTGGGCAATGCTAGAGAACATCGGATCCTACCAGTCCAAGGGTGTGCAATTTGGTGAGGTCACAACGTCTCAACCCTCAAGCTTTGGAGAAGTATCGTGTCATGAATACGAAAATAGGAAATGGTCTCATTACTTCGATCATGAGTTAAGCTTGGGGACAGTTTCATCAAAGCATCCGAAGCTAGACCAGTCTGAACCGAATAATGCAGCTGAACCAAATTTATAG 1017 0.4238 MIMGRGRTPCCDKSQVKRGPWSPSEDLKLITFVQKHGHLNWRALPKQAGLYRCGKSCRLRWVNYLRPDLKRGDFTKEEEETIIRMHAELGNKWSKIASQLPGRTDNDIKNMWNTHLKKRVQASTTTESGRDESKGSSLTSSSLSTADTSDLKSKNKSSPSHQMKGQVSTETGQDAAGQDSLEQVSDENVETVVELKELSSSVSSHFDVTDISLFENYRSLQQITPKVSGGGPYFMNKASEEVNKPDISETKNVKEQPLEVDLDFWAMLENIGSYQSKGVQFGEVTTSQPSSFGEVSCHEYENRKWSHYFDHELSLGTVSSKHPKLDQSEPNNAAEPNL* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01567 338 MobiDBLite consensus disorder prediction 319 338 - -
Pte15g01567 338 SMART sant 70 118 IPR001005 -
Pte15g01567 338 SMART sant 17 67 IPR001005 -
Pte15g01567 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Pte15g01567 338 CDD SANT 20 65 IPR001005 -
Pte15g01567 338 SUPERFAMILY Homeodomain-like 16 112 IPR009057 -
Pte15g01567 338 Pfam Myb-like DNA-binding domain 18 65 IPR001005 -
Pte15g01567 338 Pfam Myb-like DNA-binding domain 71 116 IPR001005 -
Pte15g01567 338 CDD SANT 74 116 IPR001005 -
Pte15g01567 338 MobiDBLite consensus disorder prediction 119 188 - -
Pte15g01567 338 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Pte15g01567 338 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 6 215 - -
Pte15g01567 338 MobiDBLite consensus disorder prediction 320 338 - -
Pte15g01567 338 Gene3D - 73 140 - -
Pte15g01567 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 65 IPR017930 -
Pte15g01567 338 ProSiteProfiles Myb-like domain profile. 13 65 IPR001005 -
Pte15g01567 338 MobiDBLite consensus disorder prediction 119 187 - -
Pte15g01567 338 FunFam Transcription factor RAX3 11 71 - -
Pte15g01567 338 Gene3D - 10 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01567 Pte-Chr15 13243965 13245469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01567 3 120 MYB Transcription Factor Family AT1G56160 77.966 4.77e-69 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte15g01567 Myb_DNA-binding 1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01567 K09422 - tcc:18594753 310.842