Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01564 ATGAAAGATGGTGGTCGGAAACAGGGTGCAATATCACCATGCGCAGCGTGCAAGCTTCTTCGAAGAAGATGCACTCAGGATTGTGTCTTCGCTCCGTATTTTCCAGCTGATGAGCCTCACAAATTTGCAAGTGTTCACAAGGTCTTCGGAGCTAGTAATGTCAACAAAATGCTGCAGGAACTGCCTGAGCATCAACGCAGTGACGCAGTTAGCTCCATGGTGTACGAGGCAAATGCTAGGGTAAGAGACCCTGTGTATGGTTGTGTTGGAGCCATATCATCCCTACAACAGCAAGTTGATTTCCTCCAAACACAATTGGCACTTGCACAAGCTGAAGTTGTACACATGAGAATGCGCCATGTTACATCAAGCTCAGACCCTGCATCAGCCAAAAATTCAACGTCCGACAATGGTACCCCATCAGCTAGCAGGCTCATATCAAATTCTCAGACCAAATCCTATTTTTCTTTGGAGATGGTCGTTGATCAGACCAACATGGCTGAGTCTCTTTGGTCATGA 519 0.4663 MKDGGRKQGAISPCAACKLLRRRCTQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDFLQTQLALAQAEVVHMRMRHVTSSSDPASAKNSTSDNGTPSASRLISNSQTKSYFSLEMVVDQTNMAESLWS* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01564 172 Coils Coil 92 112 - -
Pte15g01564 172 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 143 - -
Pte15g01564 172 MobiDBLite consensus disorder prediction 122 145 - -
Pte15g01564 172 MobiDBLite consensus disorder prediction 119 145 - -
Pte15g01564 172 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Pte15g01564 172 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01564 Pte-Chr15 13175226 13178421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01564 1 172 AS2 family AT1G31320 68.605 1.84e-72 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte15g01564 LOB 1.3e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01564 - - qsa:O6P43_001193 278.1