Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01547 ATGTTCAGAGACATTGAGTCAGTACTCCAGCCTGAAGTCTTTCTTTTCCTTTCTCCTAAGCTTTTTCAGATTGTGATGGATGACACATACAGTTGGCTCCCCCTTGATATGAATCAAAACCAAAACCATGATTTTGCCATTAGAAGATTTTGTCCTGCAAGAATGGAACAAGAACAATATGGAGACTTTGAGGAAGCGGTACTGTTTGATGATATTGAACAGTACTACTGTCCTTCTGAACCTACTAGCAGTACTATTCCATGTTTATCTTCTTCCGAGGCGAATGATTTTGTTGATAGCTTCATCAACCTGGATCAGTATGACACCAATCTCAACGATGTCAAAGAATCCCCAGAAACGCAACAAAACATTCAAAACTTTCAAGATGACATCGAAGCGTATTCCACAATGTTCGGTGTGTTTGAAGATGTTCCAATGATGATAGAGAGTGATCCTCAGTTTGGAGGAAATGCCTATTCTGAGATCAACCCCACAATAGTTGATAGCCAAGATACAGATCAAGGACTCTATTTGGTACACATGCTACTGGCTTGTGCAGAAGCAGTAGGATGCCGAGATATCCCACTGGCAGACACAATCCTCAGCAACATATGGATGCTTTCTAATCCTTGGGGTGACTCATTGCAGAGAGTCTCATATTGCTTTGCCACAGGATTGAGGTGCAGGCTATCAAAGCTTCATCCGAATGTCAAATTACCTTCAGACATTGATGCCTCCATGATTACCAAGGAGGAAAAGTTTGAGGCTTTTCGTCTTTTTTACCAAACCACTCCTTATATTTCTTTTGGATTCATGGCTGCAAATGAGACCATATGCCAAGCTGGTCAAGGGAAGAGCTCTTTGCATATTATTGATCTGGGGATGGAGCATGCCCTTCAATGGCCTTCTCTGATAAGATCTCTTGCTTCAAGACCAGAAGGTCCTCCTAGGCTACGCATCACTGGATTAACCACTGATGAAAATATGTTAGACCTTGAATCCAGCATGAAAGCTCTAATGGAGGAGGCTAAATCTTCTGGAATTGCAATGGAGTTTCAAATCATAACAGAGCCTGTAACTCCCACTCTTTTAACTAAGGAGAGGCTGAGCTTAAGAGAAGGGGAAACATTATTAGTGAATAGCATCATGAATTTGCACAAATACGTCAAAGAGAGTAGAGGATCTCTCAAGGCAATCCTACAAGCAATCAAGAAGTTAGGCCCTACTGCCCTTACAGTGGTAGAGCAAGATGCTAATCACAATGGCCCTTTCTTCTTAGGCAGGTTCCTTGAATCTTTGCATTACTACTCTGCACTCTTTGACTCTCTTGAAGCTAGTCTTCCAAGAAATAGTCCCCAAAGACTTAAGATTGAGAGGCTCCGGTTTGCAGGAGAAATTTGTGATATTGTGGCAAATGAAGGTCCAGAAAGGATTGAAAGACATGAAAGGGTAGATCAATGGAGAAGGCAATTAGGCCGAGCTGGGTTTCAAGTAATGGCACTGAAATGCTTGAGTCAAGCAAGGATGATGCTATCTGTTTATGGCTGCCATGGATATACATTGACAAGTGAGAAGGGTTGCCTTCTGCTTGGGTGGAAAGGAAGGCCTATAATGTTAGCTTCAGCATGGAGATGCACAATGTAG 1644 0.4221 MFRDIESVLQPEVFLFLSPKLFQIVMDDTYSWLPLDMNQNQNHDFAIRRFCPARMEQEQYGDFEEAVLFDDIEQYYCPSEPTSSTIPCLSSSEANDFVDSFINLDQYDTNLNDVKESPETQQNIQNFQDDIEAYSTMFGVFEDVPMMIESDPQFGGNAYSEINPTIVDSQDTDQGLYLVHMLLACAEAVGCRDIPLADTILSNIWMLSNPWGDSLQRVSYCFATGLRCRLSKLHPNVKLPSDIDASMITKEEKFEAFRLFYQTTPYISFGFMAANETICQAGQGKSSLHIIDLGMEHALQWPSLIRSLASRPEGPPRLRITGLTTDENMLDLESSMKALMEEAKSSGIAMEFQIITEPVTPTLLTKERLSLREGETLLVNSIMNLHKYVKESRGSLKAILQAIKKLGPTALTVVEQDANHNGPFFLGRFLESLHYYSALFDSLEASLPRNSPQRLKIERLRFAGEICDIVANEGPERIERHERVDQWRRQLGRAGFQVMALKCLSQARMMLSVYGCHGYTLTSEKGCLLLGWKGRPIMLASAWRCTM* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01547 547 Pfam GRAS domain family 178 544 IPR005202 -
Pte15g01547 547 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 128 543 IPR005202 -
Pte15g01547 547 ProSiteProfiles GRAS family profile. 169 544 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01547 Pte-Chr15 12844009 12845742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01547 165 546 GRAS Transcription Factor Family AT1G66350 39.332 7.39e-85 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte15g01547 GRAS 2e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01547 - - qsa:O6P43_029374 678.707