Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01546 ATGGAACAATTCAGAAAACAGAACCATATTCATGACAATAATATGGAACCTGGTAATGAGGAATTTTATTCTGCATCTCAGTCAGTTATGTTGGGGAATCTGCGACCGGAAGGTGAAAATGTTAGAGCTAGACCATCTGGGGTGAACATATCTGAAGTTAAACCTGTACACAATTATTCAATACAGACAGGAGAGGAGTTTGCTCTTGAATTTATGCGAGATCGGGCAAATCCCAGGAAGCCTATGTTCCCCAATACTATTGGTGATTCCAGCAACTCAACAGGTTATATGGAATTAAAAGGCATATTGGGGATCAGTCACACAGGATCAGAATCTGGATCTGATATTTCTATGATGACAATGGTAGATAAAGGTCGGATGGAGTTTGACATGAAAAATTCCTCCCTGCATGAAAGCAGAAGCAACTATGAATCAGTTCAATCTATGCCAAGAACATCTTCTAATAATAACAGTACCCCAGGAGTGCTTCATGGTTATGCATCTTCTGGAGCCCCTGATAGTTTGTCATCTAAGATGAAGGTGCTGTGCAGCTTTGGTGGTAGAATTTTACCCCGGCCAAGTGATGGGAAGCTGAGATATGTTGGGGGAGAGACACGTATTATTCGTATTAGAAAAGATATATCTTGGAGGGAACTTATGCAGAAGACATTATCAATCTATAATGAGGATCATGTGATCAAATATCAACTTCCAGGGGAGGACCTTGATGCCTTGGTATCTGTAACGTGTGACGAGGACCTGCAGAATATGATGGAGGAATGCAATTGTTTAGATGATAGGGAAGGATCACAAAAACTCAGAATATTTTTGTGCTCTATGAATGATTTGGATGATCAACTTGGTCATGGTAGTATGGATGGTGATTCTGAGGTCCAATATGTTGTTGCTGTCAATGGAATGGAGATAGGATCAAGGAAAAAATCAACTATACTCGGTGCTAGCTCATCTGCAAATAATATAAATGATTTTGATAGGCAGAATTCTGATAGGGAGACTGGCAGAGTTGCAACAGGCTCTGTTGCTATTGGTGATTCTCATTTGACTGGCAATATCATCTCGTCTTCGAGTCATCTGCCTCAGGGATCTATTATGCCAACTCCAGTTGCTTATGAAACCTATCCGGTATTATATGGTGGCCAGGTGATGCAACCTGGGGAAAGCATGCAACATCCTTTGCATTATGGCTACTCTCCTTCAAGTAATTCTGTTCTCAGTCAAAATCATCCCCAACTTCATCCGCATGGTCTAGTAAATGAAAGAGATACTGTGGATGGTGAACATCCTCTTCATCATGAAAACTATTTGGAACCTACAACTCATTCAAAGAAAGAAAGTGATGGATCAGTGCAGAAAGGAAGTGAATCTGTAAAAAATGCCCCACTAGAGAGACAGTGCCACATTCCTCCACGGCCATTTGACGGAAATTTGAAGAATGACTACCCTGAAGCGTCATTTGCTGGACCTGTAAGAGAGGGACAACTTCCTCTATTGCCATCAAAAGATAAGGTTAAGTACAGGGAAGGTGAAGAGACTCCTTTGGTGAGTGGTGGAATGAATCCAACTCAGATTCCAAAATCTAATGGGGATACCATTTATTCTTCACCTATCTTTGCTGTTGGACCTGCTACTAATTCCGAGCCCAATATGATTGATCTAAGTTCTCTTGAACCGCCTCCACTTCCTAAGAGAATCTATTATTCTGAAAGAATTCCGAGGGAGCAGGCAGAGTTACGGAATAGATCCTCAAAGTCCGATGACACTCATGGTTCCGAGTTTCTCATGGCACATTTACAACCTGGGATCAACCAGCAGAATGTTACTGAATGCAGTGACAAATTGCTTGAGCGTAATTTTCCCCATGGAAAGGAAAATGCTCCTGACCATTTTGTAGATGATGTGCTTACTCAATCACACAATTACAAAGAGATGCCGGATGTGACTGAGGTGAATGCATTGCTATCTGATCTGAAGAAGGGATCACCAAGCAATGCAGAGACTAATAGTGCTAAGGACGTGGATTCCATTCCGAAGCCTGACCTTGAGACAACTGACTCTGGAGATCCTTTTAACAAGCATGATTGCTATGTGAAGCAGAATGATGATCCAATATTGAAACTCCCAGAAATTGATTGGGGTGTGGAATCTGGCAAAGAATCTTATATTGATAATACAATGAAAGCACATCCTTTTTCACAGACTGTCAACACAACTAATGAAGTTTCTGAGGACTTAGTGTCAAATGGTGTCTCAAAACCACAAGGGGACATTCTTATTGACATTGATGACCGGTTTCCCCGTGATTTCCTTTCTGATATATTCTCCAGAGTACTTTCCGATGAGCCCTCTGATATTAATCCTCTGTCCAAGGATGGTGCTGGCTTGAGTTTAAACATGGAAAACCATGAACCTAAACGTTGGTCATATTTTCAGAAGTTGGTGCAGGAAGGTTTTGATGACAAAGCCGTTTCACTTATTGACCAGGATGATGTTAGTTTTTCATCTGCTCTTAGAAAGATAGATGAGATGGACAGTAAAACTCAAAATTTTGCACCTATAACATTGGAAAGAGTTCCAATGAGCCAGGCAGAATCACACATCAATTTTGTTCAAGATAACCAAATTCCTGGAGTAATTGGTGTTAATGCAGCTGTTCAATCAAATTATGATCAGTCTCAAGTGAAAGTCACAGAAAGCATGCAGTTTGATGCTATCATTGAAAATCTTGGGATGCAACAATCGGAATATGAGGCTGGAAGACACGAATCAAGAAATAAATGTGTCCCTCTATTGGATCCATCTTTGGGAGATCTTGACATCAGTACTTTGCAGGTCATAAAAAATGAAGATCTGGAAGAGCTGAGAGAACTTGGTTCTGGTACCTTTGGAACTGTGTATCATGGAAAATGGCGAGGGACAGATGTTGCTATCAAAAGAATAAAGAAAAGCTGCTTCACTGGCCGATCATCAGAACAAGAAAGGCTGACTATAGAGTTCTGGAGAGAAGCTGACATCCTCTCAAAGCTTCACCATCCAAATGTGGTTGCATTCTATGGTGTGGTCCAAGATGGGCCAGGAGGGACCTTAGCAACTGTTACTGAATTTATGGTCGATGGTTCTCTTCGTCATGTTTTACTTCGCAAAGATAGGCATCTTGACCGTCGTAAGAGGCTTATAATTGCTATGGATGCAGCTTTTGGGATGGAATACTTGCACTCAAAAAATATTGTTCATTTTGATTTAAAATGTGACAACTTACTAGTGAACATGAAAGATCCATTGCGACCAATATGTAAGGTTGGTGATTTTGGACTGTCAAAAATGAAAAGGAATACTTTGGTTTCTGGTGGTGTGAGAGGAACACTACCATGGATGGCCCCAGAGCTTCTCAATGGAAGCAGCAACAAGGTCTCTGAAAAGGTTGACGTATTCTCTTTTGGCATTGTATTATGGGAGATTCTCACGGGCGAGGAACCATACGCCAACATGCATTATGGCGCAATAATAGGTGGAATTGTAAACAACACGCTGAGACCAACAATTCCCAGTTATTGTGATCCTGAATGGAGACTACTAATGGAGCAATGCTGGGCACCAAATCCTGCAGCCAGACCATCATTCACAGAGATTGCTGGCCGGTTACGAGAGATGTCTGCGGCAGCAAGTCAACCGAAACCACAGGGAAACAAAGCATCCAAATGA 3720 0.4142 MEQFRKQNHIHDNNMEPGNEEFYSASQSVMLGNLRPEGENVRARPSGVNISEVKPVHNYSIQTGEEFALEFMRDRANPRKPMFPNTIGDSSNSTGYMELKGILGISHTGSESGSDISMMTMVDKGRMEFDMKNSSLHESRSNYESVQSMPRTSSNNNSTPGVLHGYASSGAPDSLSSKMKVLCSFGGRILPRPSDGKLRYVGGETRIIRIRKDISWRELMQKTLSIYNEDHVIKYQLPGEDLDALVSVTCDEDLQNMMEECNCLDDREGSQKLRIFLCSMNDLDDQLGHGSMDGDSEVQYVVAVNGMEIGSRKKSTILGASSSANNINDFDRQNSDRETGRVATGSVAIGDSHLTGNIISSSSHLPQGSIMPTPVAYETYPVLYGGQVMQPGESMQHPLHYGYSPSSNSVLSQNHPQLHPHGLVNERDTVDGEHPLHHENYLEPTTHSKKESDGSVQKGSESVKNAPLERQCHIPPRPFDGNLKNDYPEASFAGPVREGQLPLLPSKDKVKYREGEETPLVSGGMNPTQIPKSNGDTIYSSPIFAVGPATNSEPNMIDLSSLEPPPLPKRIYYSERIPREQAELRNRSSKSDDTHGSEFLMAHLQPGINQQNVTECSDKLLERNFPHGKENAPDHFVDDVLTQSHNYKEMPDVTEVNALLSDLKKGSPSNAETNSAKDVDSIPKPDLETTDSGDPFNKHDCYVKQNDDPILKLPEIDWGVESGKESYIDNTMKAHPFSQTVNTTNEVSEDLVSNGVSKPQGDILIDIDDRFPRDFLSDIFSRVLSDEPSDINPLSKDGAGLSLNMENHEPKRWSYFQKLVQEGFDDKAVSLIDQDDVSFSSALRKIDEMDSKTQNFAPITLERVPMSQAESHINFVQDNQIPGVIGVNAAVQSNYDQSQVKVTESMQFDAIIENLGMQQSEYEAGRHESRNKCVPLLDPSLGDLDISTLQVIKNEDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTIEFWREADILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVDGSLRHVLLRKDRHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNMKDPLRPICKVGDFGLSKMKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDPEWRLLMEQCWAPNPAARPSFTEIAGRLREMSAAASQPKPQGNKASK* 1240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01546 1239 MobiDBLite consensus disorder prediction 1 20 - -
Pte15g01546 1239 MobiDBLite consensus disorder prediction 395 482 - -
Pte15g01546 1239 MobiDBLite consensus disorder prediction 328 347 - -
Pte15g01546 1239 MobiDBLite consensus disorder prediction 138 165 - -
Pte15g01546 1239 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 950 1044 - -
Pte15g01546 1239 ProSiteProfiles Protein kinase domain profile. 957 1224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01546 1239 MobiDBLite consensus disorder prediction 421 457 - -
Pte15g01546 1239 MobiDBLite consensus disorder prediction 134 165 - -
Pte15g01546 1239 ProSitePatterns Protein kinases ATP-binding region signature. 963 988 IPR017441 GO:0005524
Pte15g01546 1239 Pfam Protein tyrosine and serine/threonine kinase 958 1219 IPR001245 GO:0004672|GO:0006468
Pte15g01546 1239 MobiDBLite consensus disorder prediction 1 16 - -
Pte15g01546 1239 PRINTS Tyrosine kinase catalytic domain signature 1076 1094 IPR001245 GO:0004672|GO:0006468
Pte15g01546 1239 PRINTS Tyrosine kinase catalytic domain signature 1039 1052 IPR001245 GO:0004672|GO:0006468
Pte15g01546 1239 PRINTS Tyrosine kinase catalytic domain signature 1191 1213 IPR001245 GO:0004672|GO:0006468
Pte15g01546 1239 PRINTS Tyrosine kinase catalytic domain signature 1147 1169 IPR001245 GO:0004672|GO:0006468
Pte15g01546 1239 Gene3D - 197 280 - -
Pte15g01546 1239 MobiDBLite consensus disorder prediction 400 419 - -
Pte15g01546 1239 SUPERFAMILY Protein kinase-like (PK-like) 947 1217 IPR011009 -
Pte15g01546 1239 Gene3D Transferase(Phosphotransferase) domain 1 1045 1239 - -
Pte15g01546 1239 Pfam PB1 domain 195 277 IPR000270 GO:0005515
Pte15g01546 1239 SUPERFAMILY CAD & PB1 domains 194 282 - -
Pte15g01546 1239 SMART serkin_6 957 1224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01546 1239 MobiDBLite consensus disorder prediction 679 700 - -
Pte15g01546 1239 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 198 280 - -
Pte15g01546 1239 CDD STKc_MAP3K-like 963 1220 - -
Pte15g01546 1239 CDD PB1_UP2 182 277 - -
Pte15g01546 1239 Gene3D Phosphorylase Kinase; domain 1 950 1044 - -
Pte15g01546 1239 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1082 1094 IPR008271 GO:0004672|GO:0006468
Pte15g01546 1239 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1045 1237 - -
Pte15g01546 1239 SMART PB1_new 193 280 IPR000270 GO:0005515
Pte15g01546 1239 MobiDBLite consensus disorder prediction 664 700 - -
Pte15g01546 1239 PANTHER SERINE-THREONINE PROTEIN KINASE 223 1222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01546 Pte-Chr15 12834580 12842932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01546 40 611 MAP Kinase Kinase Kinase AT1G16270 40.528 1.65e-101 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pte15g01546 PK_Tyr_Ser-Thr 2.3e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01546 - - cave:132173654 1372.45