Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01543 ATGCATTGCATCAAATGTTATGTTCCCACACCATTCACATCATCAGGTTTTGGCCAGCGAGCTTCCATGGCATTAAGTTCTTACTATAACTGTAATGCATTTCATACGACACTGAATTCAGAAATAAGTCCTTTTACATCAAAAGAAGCAGATCTAGCATGGGAACTACTGTTTAATAATAACGAAGATGATGGATTTTCTTCGGTTCCCAACTACTTGCCTGGTTTCTACTCTGATCCTGCCAGCTTTTCCTGTACTGATATATGTCCATATCTTCTGCCACCCACATTTCCAGGTGAACTCATCGTGTCTCTTCCCACAGAAATGTTTCCACTTGATGAGACTTACGAACACCTTCCACATCCAAAGCGCCAGAAATGCTTTCACAATCAACAATCAGTATCTGAATCTGAGCCAGTACCCGTGGACGGGTTTTTCATGAATTCCTGTGAGGTTCTACCACAACAGCAGCTGACTGCTTTGCCTCATGAGTTTAACTTTACTTCAGAAGCTAATTACTGTGGCGAGAATATTAATAATGTAACGGAGGCTTATAAGAATGTTGAAAAGAAAGGTGTTTCAACACAGAGTGTTGCAGCAAGAGAGAGGAGGAGAAAGATCTCTGAGAAGACTCAAGAGCTTGGGAAGCTTATTCCTGGTGGTAATAAGATGAACACAGCTGAGATGTTCCAAGCTGCTTCCAATTATGTCAAGTACTTGCAAGCACAAGTTGGCGTTCTTGAACTTATGGACAAACTTAAGGAGATTGAGGGGTCAGCTCCAACAGAAGATATGCAAGTCCTCCTTGCATCTTCCTCCATACAAGGGAAGCTGTACTCAAAGGAGAATTGCATTGTTCCTATAGAGTTTGTTGCTGCCTTAGCAAATCGCCATGATGTTCAATCAAGGTCGTCAATTCATGATCATCTCGTCAAGTTAATCAAATCAGATGACTGA 957 0.4148 MHCIKCYVPTPFTSSGFGQRASMALSSYYNCNAFHTTLNSEISPFTSKEADLAWELLFNNNEDDGFSSVPNYLPGFYSDPASFSCTDICPYLLPPTFPGELIVSLPTEMFPLDETYEHLPHPKRQKCFHNQQSVSESEPVPVDGFFMNSCEVLPQQQLTALPHEFNFTSEANYCGENINNVTEAYKNVEKKGVSTQSVAARERRRKISEKTQELGKLIPGGNKMNTAEMFQAASNYVKYLQAQVGVLELMDKLKEIEGSAPTEDMQVLLASSSIQGKLYSKENCIVPIEFVAALANRHDVQSRSSIHDHLVKLIKSDD* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01543 318 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 191 240 IPR011598 GO:0046983
Pte15g01543 318 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 194 249 IPR036638 GO:0046983
Pte15g01543 318 Gene3D - 193 256 IPR036638 GO:0046983
Pte15g01543 318 Pfam Helix-loop-helix DNA-binding domain 198 241 IPR011598 GO:0046983
Pte15g01543 318 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 182 286 IPR045843 GO:0003700|GO:0006355
Pte15g01543 318 SMART finulus 197 246 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01543 Pte-Chr15 12772128 12774354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01543 187 317 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 46.970 1.43e-28 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte15g01543 HLH 2.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01543 - - qsa:O6P43_029372 194.126