Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01519 ATGGCACCAGTGACTCTCCCACCCGGATTTAGGTTCCATCCAACAGATGAAGAACTTATCAGTTACTACCTAGAGAGAAAAATTACAGGCAGGACTGTAGAGCTTGAAATTATCCCAGACGTCGATCTCTACAAGTTTGAGCCTTGGGATTTACCAGATAAATCATTTTTACCAAGCAAAGATCTAGAGTGGTATTTCTATAGCCCAAGAGACCGAAAGTATCCGAATGGATCAAGGACTAACAGAGCAACAAAAGGAGGTTACTGGAAGGCAACTGGAAAAGATAGACTAGTGCACTCTAACAGAAGGCCAGTAGGAATGAAGAAGACATTGGTATACTATCGAGGCAGAGCTCCACATGGGATAAGAACTAATTGGGTGATGCATGAATATCGCCTTCTTGAATCTGCTTCTGGAACAGATTCTTCTTCTTTGAAGGACTCCTACGCATTATGCCGTATATTCAAGAAAACACAAATCTCCAAAGCTAAAGGAGATCAAACTGAGGATACCAAAAAAGAAACGACATGGGTCACAGATGAAGAATTAGGAGAGAACTCAAATGTCATTGAGATTTCAAGAGAAAAAGAAATCCCAGAGAAGTTCAGTCATGATGTTTCTTATAAAGTTCATTGTGATGCCTCTTCTTCGGACGTCACTCAGGGCACACCAGCTGAAACTGCCATAGCTGATGATTTACAAGTACAATTTGCATCCGATGAAGCCAACAGTTCTGCAGCTAATCAGTATTCAATTAGTATGGACTTCACATCAGAATTATTTCAGGACTTACAGTTACCATTCTATGCAAGCCTCCCTTATCATGTTCCACACTTGCAGATTGAAGATTTCTCTCAGATGAATGTTGCTGACACTAAGTTCTTGAAGACTGAAGAGACAGACCACTTCTTGTACGACAGTATAGAGATTGTATGA 936 0.406 MAPVTLPPGFRFHPTDEELISYYLERKITGRTVELEIIPDVDLYKFEPWDLPDKSFLPSKDLEWYFYSPRDRKYPNGSRTNRATKGGYWKATGKDRLVHSNRRPVGMKKTLVYYRGRAPHGIRTNWVMHEYRLLESASGTDSSSLKDSYALCRIFKKTQISKAKGDQTEDTKKETTWVTDEELGENSNVIEISREKEIPEKFSHDVSYKVHCDASSSDVTQGTPAETAIADDLQVQFASDEANSSAANQYSISMDFTSELFQDLQLPFYASLPYHVPHLQIEDFSQMNVADTKFLKTEETDHFLYDSIEIV* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01519 311 Gene3D NAC domain 15 162 IPR036093 GO:0003677|GO:0006355
Pte15g01519 311 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Pte15g01519 311 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 225 - -
Pte15g01519 311 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Pte15g01519 311 FunFam Nac domain-containing protein 86 15 160 - -
Pte15g01519 311 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01519 Pte-Chr15 12460168 12463039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01519 1 299 NAC Transcription Factor Family AT1G54330 51.645 5.26e-95 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte15g01519 NAM 1.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01519 - - qsa:O6P43_029418 425.246