Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01513 ATGCAAGCAGATAATGGATCTTTTGTCTATCTCATGCCAGGATTACTGCCTGGTTATTGTACATATTTTCCAGTAAATACTGTTGGCGCTGATGGACAGTATCTTAGTCAAGATACATATTCTCCAAGTCATATATTGCAGTCACCAATTTGCTTCCCTGAATATTATCCCGCTTATGGAGCTTTTGGGGATTTACAATTTACAGCAAATCCTTCTCTTGTTGGAAATGGCTATGAGGGATTTGATTCGACTCCTGCCCCTAATTGTAAGAAGGCTTCCATTGTCCATACGGCTAACACCCATTCAAAGCCGTCTTCGAAGTCTGATTTGAGCTATTCAGTCGAGAAAAAGAAGTCTGCTCCAATGTTAGATGTGTCATCTGGACGTGTTTCTGGCAGTCAGCTTAAACCATTGAATAATAAGACTTTATCAGGTGGCTCAACCATCCAATCAGATGCACTGGCGAACATTTGTTTTCCTGTTACAAATGGCCCCACGTATAATCATGGAAAGAGTGGATATCAATATCCTTACACCTTTCAAAATACAAAGGCAAATGTGAAGGGCTGGGCCAGTAACGAGAAGCAGAAAATGAGAAGCAAGAAGAGTGATGCTTTCCTTAATGAACAGAATCAGGGGCCCAATACTGCTAATGGTAAAGGTGACTTTCCATGCAATGGAACTACTGATGGGCACCTTGCATCGGAAGCAAGTATGGACATTGTAAAGAAGAACTTTTTGGTGAAGAAGGACGACTATAATCTTCCTGATTTTCCCACTAAATACGAAGATGCTCTTTTCTTTGTTATCAAATCTTACAGTGAAGATGATATTCACAAGAGCATCAAGTACAATGTGTGGGCTAGCACTCCAAATGGGAATAAAAGACTGGATGCAGCATACCAAGATGCACAAGATCGGACAACAAAGAAAGGAAGCAAGTGCCCTGTATTCCTTTTCTTTTCGGTTAACGCAAGTGGTCAGTTCTGTGGAGTAGCTGAGATGGTAGGCCGTGTTGATTTTGATAAGACTATGGGCTTCTGGCAACAGGATAAATGGAAGGGCTATTTTCCTGTTAAGTGGCATATCATAAAGGATGTTCCAAACCCCCATTTACGTCGTATAATTCTAGAGAACAATGAGAACAAGCCTGTGACAAATAGCAGGGACACTCAAGAGGTGAAATTTCGTCAGGGTATTGAATTCTTGAACATTTTCAAGAACTATGTATCAAAGACCTCCATTTTAGACGATTTTGATTTTTACGAAAGCCGTGAGAAGGTCATGCAAGAGAAGAGGATAAGAGAATCTTTGCCTTATCCTGTAAGTATGCAGGTCAGTATCGTTCAGTTCTATCTCTCTGGAACACTGCTACTTTAG 1380 0.4072 MQADNGSFVYLMPGLLPGYCTYFPVNTVGADGQYLSQDTYSPSHILQSPICFPEYYPAYGAFGDLQFTANPSLVGNGYEGFDSTPAPNCKKASIVHTANTHSKPSSKSDLSYSVEKKKSAPMLDVSSGRVSGSQLKPLNNKTLSGGSTIQSDALANICFPVTNGPTYNHGKSGYQYPYTFQNTKANVKGWASNEKQKMRSKKSDAFLNEQNQGPNTANGKGDFPCNGTTDGHLASEASMDIVKKNFLVKKDDYNLPDFPTKYEDALFFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDAAYQDAQDRTTKKGSKCPVFLFFSVNASGQFCGVAEMVGRVDFDKTMGFWQQDKWKGYFPVKWHIIKDVPNPHLRRIILENNENKPVTNSRDTQEVKFRQGIEFLNIFKNYVSKTSILDDFDFYESREKVMQEKRIRESLPYPVSMQVSIVQFYLSGTLLL* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01513 459 CDD YTH 267 406 IPR007275 GO:0003723
Pte15g01513 459 MobiDBLite consensus disorder prediction 208 223 - -
Pte15g01513 459 MobiDBLite consensus disorder prediction 208 229 - -
Pte15g01513 459 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 3 435 IPR045168 -
Pte15g01513 459 Pfam YT521-B-like domain 267 407 IPR007275 GO:0003723
Pte15g01513 459 Gene3D ph1033 like domains 242 421 - -
Pte15g01513 459 ProSiteProfiles YTH domain profile. 265 406 IPR007275 GO:0003723
Pte15g01513 459 FunFam YTH domain family 1, isoform CRA_a 244 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01513 Pte-Chr15 12402521 12405208 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01513 K20102 - qsa:O6P43_001275 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01513 15 12402521 12405208 Pte15g01513 15 12402521 12405208 RCT