Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01506 ATGATGCCAAGCAATGGACAACTTACAGTTCCTCCAGGATTCAGGTTCCATCCAACTGAGGAAGAGCTTCTCTACTATTACCTAAGGAAGAAAGTCTCATACGAAGCCATTGACCTTGATGTTATTAGGGAAGTTGACCTGAACAAACTAGAACCTTGGGATCTGAAAGATAGATGCAGAATAGGATCAGGCCCTCAAAACGAGTGGTACTTCTTCAGTCACAAAGACAAAAAGTACCCCACTGGAACTCGCACTAATAGGGCAACTACAGCTGGATTTTGGAAAGCAACAGGAAGAGACAAGGCTATATACCTCAGTAATGCAAGACGGATTGGGATGAGAAAGACCCTTGTCTTCTACACGGGACGTGCTCCTCATGGCCAAAAAACTGAGTGGATTATGCATGAGTACCGCCTTGATGATGATGATGCAGAAGTGCAGGAGGATGGTTGGGTTGTCTGCAGGGTTTTCAAAAAGAAGAACTACAATAGAGGTTTCCAAGCTGACTTTGGCGAGGAGGAAGATCTAAACCATGTGAAAGCAAGTGGCCCCTCTCAGTTCTTAGAACAAAAACAGCAACACCATCATCTGCAAGGGTTATATGATTATAACTTGGATGTCTCCATGCATCTGCCACAACTGTTCAGTCCAGAATCCACTTGCCCTGGTAGGTCTATACTGTAG 684 0.4459 MMPSNGQLTVPPGFRFHPTEEELLYYYLRKKVSYEAIDLDVIREVDLNKLEPWDLKDRCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYLSNARRIGMRKTLVFYTGRAPHGQKTEWIMHEYRLDDDDAEVQEDGWVVCRVFKKKNYNRGFQADFGEEEDLNHVKASGPSQFLEQKQQHHHLQGLYDYNLDVSMHLPQLFSPESTCPGRSIL* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01506 227 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
Pte15g01506 227 ProSiteProfiles NAC domain profile. 10 159 IPR003441 GO:0003677|GO:0006355
Pte15g01506 227 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 184 - -
Pte15g01506 227 SUPERFAMILY NAC domain 3 159 IPR036093 GO:0003677|GO:0006355
Pte15g01506 227 FunFam NAC domain-containing protein 19 163 - -
Pte15g01506 227 Gene3D NAC domain 19 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01506 Pte-Chr15 12315605 12317558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01506 6 166 NAC Transcription Factor Family AT1G79580 86.957 8.19e-107 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte15g01506 NAM 1.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01506 - - vun:114178728 389.037