Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01496 ATGAGAGGGACCCCAGTTAATATCACAGTCAGATCACATGTTTGGGTTGAGTATCCTGAGGATGCTTGGATTGATGGTGAAGTACCACAAGTAAATGGCACAGAAGCCACCATTATGGCAACAAATGTGAAGACTGTAAGCTTTGATCAACTCATCAATCCACAACATATTTCATCGGTTTTTCACAATACTTTCATCGTTACCAAAAGAAGTGGTGGCAGACATTTCAAGGCAATGATAAATGCACATGGAAGTCAATCTATATTGGTAAGTGGAGAGATTGGAGCAGGTAAAATGGAGACAACGAAAATGCTCATGAGATATCTAGCATTTATGGGGGGCAGTTGTATTTATCAATTTGAATGGTCTATAATGTCACTTCTTCTGTCTAAACCAGTTTTAGAAGTATTTGGCAATGCTAAAACTGTGAAGAACAACAATTCAAGCCTGTCCAAACTCACAAGTTACAACATGAGAGGTTGTCCTTCGTCAATGTTAACCAACTTGGCGCTTCCCAAGTTCCCTAGTTTCTTCAAGTCCTCTTTCACTATATCCATTCCCGGCATTGCTGCAGCTCCAGTGTTCCGTTCCCAAATCATTCACTGTCGTATTAACCCCTCCTCTGTTGTGCTCTGTTCTACTCAGTATAATGCTCATTCTTCGGGTATTACGCAACAAGCAGAAGCTGAAGAAAACCGCTTTCAAGTGTTAGCAGCTTTGAAAAGTGATTACAATGACATAGTCATTCTGGACACTCCAACGTTCAGAGTTCTGCTTCTTGATTCCACTCAAAATGTTCACAGCATTGTATACAAGGAGCAGAAATGGACTGCTTCTTACTGGGACGAATTTGCAAGCTTGCCAGCTATTGTGCCGAAAGGTCCCATTTCTATATTTGGTTTGGGTGGTGGAACTGCTGCTCATCTTATATTGGACTTGTGCCCTTCACTGGAGCTTGAAGGCTGGGAGATTGATCAGATTTTGATTGATAAAGCTCGAGACTTTCTAGGTCTGTCTGATCTGGAGAAGCCTACTAAAGATGGTGGTGTATTAAATATTTGTATTGGCGATGCATTAAAATTGTCAGCTAATAATCCTAGAAAATATGCAGGTATTATAGTTGATTTGTTCGCTGGTGGAAAAGTTCTTCCACAATTGCAGGAGGTTAGCACATGGATGGAATTGCAAAACCTATTGCTGCCTAATGGTCGGTTTATGGTGAATTGTGGTGGAGTTGATGGGCAATCTGATGCCCAAAATGCTGCAAATCTGCCTCCAGGGCATTTATCAATTGATAGCACATGGATGGAAAATCCTACAATTAAGGCACTCTGCAAAGCTTATCCTGGCCAAATAAGTTGGAAGAAATTGCCCAAAGAAAATGGCGAAAATTATATGGCACTGACAGGACAATTGCCAGATTTAGATATCTGGTCTGCTAACGTCCCATCTCCTTTGAGCACAAACGTGAAGCAGTGGAGACCCTGTGAACCTTCTTGA 1500 0.414 MRGTPVNITVRSHVWVEYPEDAWIDGEVPQVNGTEATIMATNVKTVSFDQLINPQHISSVFHNTFIVTKRSGGRHFKAMINAHGSQSILVSGEIGAGKMETTKMLMRYLAFMGGSCIYQFEWSIMSLLLSKPVLEVFGNAKTVKNNNSSLSKLTSYNMRGCPSSMLTNLALPKFPSFFKSSFTISIPGIAAAPVFRSQIIHCRINPSSVVLCSTQYNAHSSGITQQAEAEENRFQVLAALKSDYNDIVILDTPTFRVLLLDSTQNVHSIVYKEQKWTASYWDEFASLPAIVPKGPISIFGLGGGTAAHLILDLCPSLELEGWEIDQILIDKARDFLGLSDLEKPTKDGGVLNICIGDALKLSANNPRKYAGIIVDLFAGGKVLPQLQEVSTWMELQNLLLPNGRFMVNCGGVDGQSDAQNAANLPPGHLSIDSTWMENPTIKALCKAYPGQISWKKLPKENGENYMALTGQLPDLDIWSANVPSPLSTNVKQWRPCEPS* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01496 499 Gene3D Vaccinia Virus protein VP39 248 471 IPR029063 -
Pte15g01496 499 PANTHER MYOSIN 75 152 - -
Pte15g01496 499 ProSiteProfiles Myosin motor domain profile. 1 149 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte15g01496 499 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 235 413 IPR029063 -
Pte15g01496 499 PRINTS Myosin heavy chain signature 85 110 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte15g01496 499 PRINTS Myosin heavy chain signature 132 159 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte15g01496 499 SMART MYSc_2a 40 438 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte15g01496 499 Gene3D Kinesin motor domain 53 159 IPR036961 -
Pte15g01496 499 FunFam S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 240 488 - -
Pte15g01496 499 Pfam Myosin head (motor domain) 76 149 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte15g01496 499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 76 149 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01496 Pte-Chr15 12125442 12132907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01496 76 149 Myosins gene family AT2G31900 68.919 3.54e-22 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01496 - - aprc:113853971 396.356