Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01495 ATGATGCCAAGCAATGGACAACTTACAGTTCCTCCAGGATTCAGGTTCCATCCAACTGAGGAAGAGCTTCTCTACTATTACCTAAGGAAGAAAGTCTCATACGAAGCCATTGACCTTGATGTTATTAGGGAAGTTGACCTGAACAAACTAGAACCTTGGGATCTGAAAGATAGATGCAGAATAGGATCAGGCCCTCAAAACGAGTGGTACTTCTTCAGTCACAAAGACAAAAAGTACCCCACTGGAACTCGCACTAATAGGGCAACTACAGCTGGATTTTGGAAAGCAACAGGAAGAGACAAGGCTATATACCTCAGTAATGCAAGACGGATTGGGATGAGAAAGACCCTTGTCTTCTACACGGGACGTGCTCCTCATGGCCAAAAAACTGAGTGGATTATGCATGAGTACCGCCTTGATGATGATGATGCAGAAGTGCAGCAGGAGGATGGTTGGGTTGTCTGCAGGGTTTTCAAAAAGAAGAACTACAATAGAGGTTTCCAAGCTGACTTTGGCGAGGAGGAAGATCTAAACCATGTGAAAGCAAGTGGCCCCTCTCAGTTCTTAGAACAAAAACAGCAACACCATCATCTGCAAGGGGAGGCTGAAGCTGTGTCGTCGTCGTCGTCGTCCCTCTCAAGTGGGACTCTGCGTCTACTCAGCTCGTACATATGGGCCTAG 681 0.4655 MMPSNGQLTVPPGFRFHPTEEELLYYYLRKKVSYEAIDLDVIREVDLNKLEPWDLKDRCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYLSNARRIGMRKTLVFYTGRAPHGQKTEWIMHEYRLDDDDAEVQQEDGWVVCRVFKKKNYNRGFQADFGEEEDLNHVKASGPSQFLEQKQQHHHLQGEAEAVSSSSSSLSSGTLRLLSSYIWA* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01495 226 SUPERFAMILY NAC domain 3 160 IPR036093 GO:0003677|GO:0006355
Pte15g01495 226 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 191 - -
Pte15g01495 226 MobiDBLite consensus disorder prediction 189 213 - -
Pte15g01495 226 FunFam NAC domain-containing protein 19 164 - -
Pte15g01495 226 Gene3D NAC domain 19 165 IPR036093 GO:0003677|GO:0006355
Pte15g01495 226 ProSiteProfiles NAC domain profile. 10 160 IPR003441 GO:0003677|GO:0006355
Pte15g01495 226 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01495 Pte-Chr15 12084986 12088572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01495 6 167 NAC Transcription Factor Family AT1G79580 86.420 4.51e-106 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte15g01495 NAM 1.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01495 - - vun:114178728 356.295