Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01482 ATGGAGCTTGGTTTAAGCTTGGGTCAAACTTCAAAGACTTGCATGATGATGAAGAACCCTCGTCATGAAGCATCGAACAAGATAGACTTCAGTTGCTCCACAGCCTTATCAATTGGTCTAGTTGGGGAAGATCAGATCAAAGTACCTGAAGACGGCAACCATCACCGTAAGAAACGCCACAGCCAAGAAGGCCTGGATATGAATCAAGACGCCAATGGTTTATCTCCAAAATCTAATCATCAGTTGCCTCTCCAGCTTAATCTTCTTCCCCTTGCACCACTCGTCCTTCATCAGAGTAACAACCCACCTTCTCATCTTTCCTTTCAGCGGCCTACTTCGTCTGAAAAAGGGAGTTCAGCTGAAGCAGGTTTCTCAAAAAGACTCGAAGTGAATAGGCTGCAAAAGGAAGATGATCAAGAGGAAGGAGAAGAAGGCCCTGCAGTGTCCTCATCTCCAAACAACAGTGCCGCCTCTTCTTTTCAGATTAATCTGTGTATATATAGCAAAGGGCTGAACCAATATGGCAAGAGAGAATCGGATGGTGAGGGTTGCGATCAAAGGGCCTCCTCTAGAGCTAGTGATGAGGATGACAACAGTGGTATCAGGAAGAAGCTCAGACTCTCCAAAGAACAGTCTGCTTTTCTTGAAGAAAGTTTTAAAGAACATAGTACTCTTAACCCTAAACAGAAGCTTGCTCTTGCAAAACAACTTGGTCTTCGTCCGAGGCAAGTAGAAGTTTGGTTTCAGAATCGAAGAGCTAGAACGAAGTTGAAGCAGACAGAGATTGACTGTGAATACATGAAAAGGTATTGCGAGACATTGACCGAAGAGAACAGAAGACTTAGCAAAGAGCTTCAGGAACTAAGAGCTTTGAAGACTTCAAACCCATTCCACATGCAATTACCGGCAACTACACTAACCATGTGCCCCTCTTGTGAGCGCGTAGGCACTAATTCAACTTCTGCCATCTCTAAAACTCCATCATCCACCATCCATACTAATGGGGTCAGTACTAATGCTTCTAGCAAAGCTAATGACCCTAACAACAACACCAGCATTGGCTTCTCTCTTAGTAGACCTAAGTTCTATGGCCTTTTGCTCCCACCTAACTAA 1113 0.4429 MELGLSLGQTSKTCMMMKNPRHEASNKIDFSCSTALSIGLVGEDQIKVPEDGNHHRKKRHSQEGLDMNQDANGLSPKSNHQLPLQLNLLPLAPLVLHQSNNPPSHLSFQRPTSSEKGSSAEAGFSKRLEVNRLQKEDDQEEGEEGPAVSSSPNNSAASSFQINLCIYSKGLNQYGKRESDGEGCDQRASSRASDEDDNSGIRKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEIDCEYMKRYCETLTEENRRLSKELQELRALKTSNPFHMQLPATTLTMCPSCERVGTNSTSAISKTPSSTIHTNGVSTNASSKANDPNNNTSIGFSLSRPKFYGLLLPPN* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01482 370 Coils Coil 271 294 - -
Pte15g01482 370 MobiDBLite consensus disorder prediction 100 155 - -
Pte15g01482 370 ProSitePatterns 'Homeobox' domain signature. 233 256 IPR017970 GO:0000981|GO:0006355
Pte15g01482 370 Pfam Homeodomain 202 256 IPR001356 GO:0003677
Pte15g01482 370 FunFam Homeobox-leucine zipper protein 18 188 263 - -
Pte15g01482 370 Gene3D - 206 256 - -
Pte15g01482 370 MobiDBLite consensus disorder prediction 100 120 - -
Pte15g01482 370 MobiDBLite consensus disorder prediction 66 80 - -
Pte15g01482 370 SMART halz 258 301 IPR003106 GO:0006355|GO:0043565
Pte15g01482 370 SMART HOX_1 200 262 IPR001356 GO:0003677
Pte15g01482 370 PRINTS Lambda-repressor HTH signature 229 238 IPR000047 GO:0003677
Pte15g01482 370 PRINTS Lambda-repressor HTH signature 238 254 IPR000047 GO:0003677
Pte15g01482 370 MobiDBLite consensus disorder prediction 320 353 - -
Pte15g01482 370 SUPERFAMILY Homeodomain-like 193 259 IPR009057 -
Pte15g01482 370 MobiDBLite consensus disorder prediction 45 80 - -
Pte15g01482 370 Pfam Homeobox associated leucine zipper 258 292 IPR003106 GO:0006355|GO:0043565
Pte15g01482 370 MobiDBLite consensus disorder prediction 47 65 - -
Pte15g01482 370 MobiDBLite consensus disorder prediction 176 203 - -
Pte15g01482 370 CDD homeodomain 202 259 IPR001356 GO:0003677
Pte15g01482 370 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 62 333 - -
Pte15g01482 370 ProSiteProfiles 'Homeobox' domain profile. 198 258 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01482 Pte-Chr15 11916458 11918240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01482 188 315 Homeobox Transcription Factor Family AT4G37790 73.282 5.35e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte15g01482 Homeodomain 6.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01482 K09338 - qsa:O6P43_029477 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01482 15 11916458 11918240 Pte15g01482 15 11916458 11918240 RCT