Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01478 ATGGAAAAGCCGAAGCCTAACGACAACAACCAACGTACCCACACCCACACCGAAAACCAAACTTGGGGGACGTGGGAAGAGCTCTTACTAGCATGTGCTGTAAAACGACATGGTTTCAAGGACTGGGATTCCGTCGCCATGGAAGTTCAAACACGAACTTCTCTTCCTCCACTCCTCACCACCGCTTGTAACTGTGAACTTAAATTCAACGACCTCAAACGCCGTTTCACTAAACTCTCCAACTCTCACCTCAACGACAACAGCCGCCATCAAAACGACAACGGCACTCTCTCTCCTGGCAACGTTGATACAGTCGATCACATCCCTTGGCTCGACGAGCTACGTAAACTCCGTGTCGCTGAGCTTCGTCGACAAGTCCAACGCTCCGACGTCTCCATTCTGTCGCTACAGTTGAAAGTGAAGAGGCTAGAGGAAGAGAGAGAACGAAGCTTGAAGGAGAAACAAGAAAGTGGTCAAGATAATAAACCAGATCTGGAAGTTTCGGCTGGATGCAGATCAGAAAACAACGAAAAACCAGTTGAGGAATGGAATACTATCGAACCGGACGGTTCAGAACCGGTTGGCAATGACGGTGGGAAGCCGGTTCATGGTGATGAATCGGACCGGGATAACCAGTCAGTTAATGAGTCTAATTCAACTGGTTCTAGATCCGAGAATGGGGAAATCGGCAAGGAAGTGAGGGAGGTCAAGTTGGAGCCGGAGGTAGTCGGAGATAATAATCGAGAACCGGTTAATCTAGGTGATAAACCGGTCGGAAGAGAATCGGGAAATAAAAGCGGGGAGTGTGAGTCAATACAACCGAGTGAAGAAAAGAAAGTAGAGGACTCGTTCGAGTTGAGAGACTCGGATGCGGATGGGGAAGTGGTTGTGACAAAGGAGAGTAGTGAGGTACAAAGCTCAGCAACTCTGACGGGAAAAAGGAATAAAAGGCGGAGGAAGGAGCTTTCTGGTGGTACCAGCGGAGAAGATCAGCCTGAGAACGAGGAGGTGTCTGTGAAATCACAACCGTTGGCTGGGATTTTGGAGATGATCAAAGGCCACGAAAATAGCTCATTGTTTGAGCGCCTTCTCGAAAATCAGGAATCTGAGAAGTACAAGAAGTTGGTGCGACAACACGTGGACTTGCAGAAAATACAGACGAAGCATGATACAGGCTACTATTCATCTTGTGGCCTAGCGCTGTTCCGAGACTTGCTACTTCTCTTCAACAACGCGGTGCTTTTCTTCCCCAGAGACTCAGTTGAATCAACCGCTGCTCACCAACTGAGGCGTATTGTGTCCAACGAAATCAAGGCTCATATTCAAAACCCACCACCTCAATCACCTCATCCCAAACCTCAATCCTTCGAAAGATCAGAATCTCTTGCTTCCAAACATAATTCGTCTCAACCTATATTGGTTTGTAGGAAAAGAAGTTCCATCGCAGCGAAGACGTCTTCTGGCAATGCTGGTCAGCAAAGTGATGACAATAAGAAGCTATGTTCGGACAGCAAGCCTCCCATCAAGTCCTCTTCATCGGAAACAGCTGAAGAGGATCCTACAGTAGACGCCAAACCCAAAGAGAAGCCTACAACGGGAGTGAGAAGCTTTAGAAGAAGTAGCAAGAACCTTATAAATAATATCAATAGTAATTCAAGTAAGAAGCCCGTGATGAACAGTTCAGGTTCAAAAGCTGGTTTAGCCAACAAGTCTGCAGAGAGTCTCCCCAAAGTTGCCGATAAGAAGAAATTGGAGTCTACGACCACAACAGAGAAGAAGCGAAGTGCGGCAGATTTTTTGAAAAGAATTAAGCGGAATTCTCCTGCTGAGACATTGAAGATGGCAAGTGGAAGCAATAGTAAAACTGCTGGTAGCAGTGGTAAAGAGCAGAAGAAAACGAATGGTAATGGCAGAAACGATCGAGGCAAGGACCGGATATTGAGGAATAGCGATAGAAAGGATGGCAATGACAATAATGTCAACAACCCATCCAAGAGAAATGTTGGCAGACCTTCAAAAAGGGGGTTAGAAGCTGACGCAGTTTCTGGTAAGCGTGCCAGGGAGAGTAATACCAAGGAAGAAGCAGCCCAAAAAAAACCCAAGAAACGTGCTAGGAGGTGA 2121 0.4682 MEKPKPNDNNQRTHTHTENQTWGTWEELLLACAVKRHGFKDWDSVAMEVQTRTSLPPLLTTACNCELKFNDLKRRFTKLSNSHLNDNSRHQNDNGTLSPGNVDTVDHIPWLDELRKLRVAELRRQVQRSDVSILSLQLKVKRLEEERERSLKEKQESGQDNKPDLEVSAGCRSENNEKPVEEWNTIEPDGSEPVGNDGGKPVHGDESDRDNQSVNESNSTGSRSENGEIGKEVREVKLEPEVVGDNNREPVNLGDKPVGRESGNKSGECESIQPSEEKKVEDSFELRDSDADGEVVVTKESSEVQSSATLTGKRNKRRRKELSGGTSGEDQPENEEVSVKSQPLAGILEMIKGHENSSLFERLLENQESEKYKKLVRQHVDLQKIQTKHDTGYYSSCGLALFRDLLLLFNNAVLFFPRDSVESTAAHQLRRIVSNEIKAHIQNPPPQSPHPKPQSFERSESLASKHNSSQPILVCRKRSSIAAKTSSGNAGQQSDDNKKLCSDSKPPIKSSSSETAEEDPTVDAKPKEKPTTGVRSFRRSSKNLINNINSNSSKKPVMNSSGSKAGLANKSAESLPKVADKKKLESTTTTEKKRSAADFLKRIKRNSPAETLKMASGSNSKTAGSSGKEQKKTNGNGRNDRGKDRILRNSDRKDGNDNNVNNPSKRNVGRPSKRGLEADAVSGKRARESNTKEEAAQKKPKKRARR* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01478 706 MobiDBLite consensus disorder prediction 483 497 - -
Pte15g01478 706 Pfam Myb-like DNA-binding domain 20 54 IPR001005 -
Pte15g01478 706 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 5 706 - -
Pte15g01478 706 SUPERFAMILY Bromodomain 340 444 IPR036427 GO:0005515
Pte15g01478 706 MobiDBLite consensus disorder prediction 271 297 - -
Pte15g01478 706 MobiDBLite consensus disorder prediction 440 470 - -
Pte15g01478 706 MobiDBLite consensus disorder prediction 516 535 - -
Pte15g01478 706 Pfam Bromodomain 347 426 IPR001487 GO:0005515
Pte15g01478 706 MobiDBLite consensus disorder prediction 575 608 - -
Pte15g01478 706 MobiDBLite consensus disorder prediction 227 244 - -
Pte15g01478 706 CDD SANT 21 79 IPR001005 -
Pte15g01478 706 SMART bromo_6 337 442 IPR001487 GO:0005515
Pte15g01478 706 MobiDBLite consensus disorder prediction 611 632 - -
Pte15g01478 706 MobiDBLite consensus disorder prediction 483 706 - -
Pte15g01478 706 MobiDBLite consensus disorder prediction 453 470 - -
Pte15g01478 706 SMART sant 18 75 IPR001005 -
Pte15g01478 706 MobiDBLite consensus disorder prediction 82 101 - -
Pte15g01478 706 MobiDBLite consensus disorder prediction 82 105 - -
Pte15g01478 706 MobiDBLite consensus disorder prediction 670 698 - -
Pte15g01478 706 MobiDBLite consensus disorder prediction 536 568 - -
Pte15g01478 706 MobiDBLite consensus disorder prediction 149 338 - -
Pte15g01478 706 ProSiteProfiles Bromodomain profile. 352 423 IPR001487 GO:0005515
Pte15g01478 706 MobiDBLite consensus disorder prediction 633 659 - -
Pte15g01478 706 SUPERFAMILY Homeodomain-like 15 54 IPR009057 -
Pte15g01478 706 Gene3D - 331 443 IPR036427 GO:0005515
Pte15g01478 706 Coils Coil 133 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01478 Pte-Chr15 11892934 11897198 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte15g01478 Bromodomain 2.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01478 - - qsa:O6P43_029480 620.157