Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01469 ATGAGCAGCTTGTATGGTCCAATTAGATATTCAGAAGAGGAACTGAGGAAGAATACAAAATTCATGGACTCGAGAGATTACCATCAACAACATATTCATCATTATAATTCTGGTCTGGTGCGGATTAGAAGTGATGAGCAAGCCATTAGAAGTGAGGATGATCATCCTTATTCTCAAACATTAAGCTCAGAAACAGAAACCTTATTGGCTAAGTTCATGTCCTCAAGCAACGGATGGAGTCATTCTGATTCCTTCATAGGAGATAATTCTGTCAAGCAAGAAGCTATGGAATCTGCTCCACAAGGAGTCCAAAATGGTTATGCTTATGAACCTCATATGAGTTATCAGCCTCAAGCTTCAGGGTATCCAAATCTTAATTTCAATGCTAGAAATCATTTTGACGGATCATTTAGTATGCAGAACTCTTTGGACGTTCCTGAATATGCATTGCAGCCTGAAATGGATTTCAGAAATAGCTCCAGTCTTATTAGGCAGAATAGCTCACCGCCTGGATTTTTCAGTAAATCAATAGTTGAAAATGGTTTTGCTGGATTGACACAGATGGGTGGATCAAGAGCTTCAGATATCGGAAATGGAGTAGCTAAAGCATCAGCTATTAACGACTGTAAGAGTCGCTACTTATCCAGAGAAAATATAGATGCAGCCGTTCATGAAAGTGGAATCCTGGAAATTTGTGATGGAAACAGAAAAGCCAAGTCTACCGGTTTCGTCAACGACTCTTGGGACAGTGGGGCATTTAGTGGCCTCAAACCAGCTAGAGACAATGATGGGAACATGTTTTATATTTCCAATTCAAAGGAAATTCAGGCCGCAGAAGTGAAACAGCATAATCATGGTTTGTGTAAGCAATTGAGTTGGCCTAGTTCTTCTACGAAGATGGTTTCCGCAGAGAAGCTTTTCCAACTTCAAGGTTCTGTGCAATTTAAGATTCGAGCCAAAAGAGGCTTTGCTACTCACCCAAGAAGCATTGCGGAGAGGATAAGAAGAACACGGATTAGCGAAAAAATTAAGACACTGGAAGGACTTTTCCCAGAAATGGACAAGCAAGCCAAAACAGCTGATAAGTTAGAACTAGCAGTCTGGTATATTAAAGATCTTCAGAAACAAATTAAGATGCTCACATCTGCTAGAGTGAAGTGCACATGTTTAAGTGAACCTGAACAAGATTGA 1191 0.4005 MSSLYGPIRYSEEELRKNTKFMDSRDYHQQHIHHYNSGLVRIRSDEQAIRSEDDHPYSQTLSSETETLLAKFMSSSNGWSHSDSFIGDNSVKQEAMESAPQGVQNGYAYEPHMSYQPQASGYPNLNFNARNHFDGSFSMQNSLDVPEYALQPEMDFRNSSSLIRQNSSPPGFFSKSIVENGFAGLTQMGGSRASDIGNGVAKASAINDCKSRYLSRENIDAAVHESGILEICDGNRKAKSTGFVNDSWDSGAFSGLKPARDNDGNMFYISNSKEIQAAEVKQHNHGLCKQLSWPSSSTKMVSAEKLFQLQGSVQFKIRAKRGFATHPRSIAERIRRTRISEKIKTLEGLFPEMDKQAKTADKLELAVWYIKDLQKQIKMLTSARVKCTCLSEPEQD* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01469 396 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 323 373 IPR011598 GO:0046983
Pte15g01469 396 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 132 390 - -
Pte15g01469 396 Pfam Helix-loop-helix DNA-binding domain 329 374 IPR011598 GO:0046983
Pte15g01469 396 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 326 384 IPR036638 GO:0046983
Pte15g01469 396 Gene3D - 325 390 IPR036638 GO:0046983
Pte15g01469 396 SMART finulus 329 379 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01469 Pte-Chr15 11784718 11786516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01469 22 379 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 32.552 4.14e-34 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte15g01469 HLH 6.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01469 - - qsa:O6P43_029512 328.946