Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01468 ATGGTTCGCACTAATGGGTTCAAGCTTGTTGATTCGGTTGGTCGTCGGTATATGGCTGCTTGTTCCACACACTCCAGTAAGGCGCTTTGTCAAAGAGATTATATGACTTCCAATTCAGCGTCAAGCAAACTATCATCTAGAATTTTTTGGAATTATATTTCAATACATGCTGAGAATTCCCTTGATCAAAGGAACTGGTTGTTACTCGGAGCACCAAATTACCATTTTTGTGGAGCTAGATCGATTCACAGCACTGCATCATTGGCGAGAGACTATTATGATGTCCTTGGTGTCAGCAAGAATGCAAGCGCATCAGAAATAAAGAAAGCTTATTATGGGCTTGCTAAAAAGTTGCATCCAGATACAAATAAAGATGATCCTGAAGCTGAAAAGAAATTCCAAGAAGTTTCAATAGCATATGAGGTGTTGAAGGATGACGAGAAGCGTCAAGTGTATGATCAGGTTGGCCATGATGCATATTTGAACCAACAAAGCACAGGATTTAATGATGGCGGTGGTCCTGGATTCAGTCCATTTGATCATATGTTCCGAGATGCTGATTTCATGAAGGGAATTTTCCATCAGAATGGAGGAGAAGATGTCAAGGTTGCAATTGATCTTTCCTTTACAGAAGCTGTCCAGGGGTGTAGTAAAACTATAACATTTGAAACTGATTTGCTCTGTGGATCTTGCGGGGGAAGTGGTGTACCACCTGGAACCAGACCAGAAACCTGTAAACGTTGCAAAGGAGCGGGCATGACTTTTATACAGACAGGAATATTTAGGATGGAGAGTACTTGCGCCGTCTGTAGAGGAACTGGGAAAATTGTATCTAACTTCTGTAAAACGTGCAAGGGTGCAAAGGTTGTAAGAGGAAGAAAGAATGTTAAGTTAAATATCTCACCAGGGGTCGATAATGGTGAAACCGTAACGATGCATAGAAGTGGGGGAACTGATCCTGATGGAGATCATCCTGGTGATCTTTATGTTGTCGTTAAAGTGCGGGAAGATCCTGTGTTCCGCAGAGAAGGATCTGACATTCACGTAAATGCAGTTTTGAGTATAACCCAGGCAATTTTGGGAGGAACCATTCAGGTCCCAACTCTTACTGGAGACGTAGTTGTCAAGGTTCGACCAGGCACCCAACCTGGTCAGAAGGTGGTCTTGAAAAAGAAAGGAATCAAAACAAGGAAATCCTATACGTTTGGTGATCAATATGTTCACTTTAATGTCAGCATCCCTGCCAACCTGACCCCAAGACAAAAAGAATTGATCGAAGAGTTTGCCCAAGAAGTGGAGGGGGAATGTGATGGACAAAGGGCTGCTTCAGCTTCAGGATAA 1341 0.4265 MVRTNGFKLVDSVGRRYMAACSTHSSKALCQRDYMTSNSASSKLSSRIFWNYISIHAENSLDQRNWLLLGAPNYHFCGARSIHSTASLARDYYDVLGVSKNASASEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSIAYEVLKDDEKRQVYDQVGHDAYLNQQSTGFNDGGGPGFSPFDHMFRDADFMKGIFHQNGGEDVKVAIDLSFTEAVQGCSKTITFETDLLCGSCGGSGVPPGTRPETCKRCKGAGMTFIQTGIFRMESTCAVCRGTGKIVSNFCKTCKGAKVVRGRKNVKLNISPGVDNGETVTMHRSGGTDPDGDHPGDLYVVVKVREDPVFRREGSDIHVNAVLSITQAILGGTIQVPTLTGDVVVKVRPGTQPGQKVVLKKKGIKTRKSYTFGDQYVHFNVSIPANLTPRQKELIEEFAQEVEGECDGQRAASASG* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01468 446 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 31 433 - -
Pte15g01468 446 CDD DnaJ_zf 228 288 IPR001305 GO:0031072|GO:0051082
Pte15g01468 446 Pfam DnaJ central domain 228 288 IPR001305 GO:0031072|GO:0051082
Pte15g01468 446 Gene3D - 335 441 - -
Pte15g01468 446 FunFam Molecular chaperone DnaJ 220 293 - -
Pte15g01468 446 PRINTS DnaJ domain signature 128 148 IPR001623 -
Pte15g01468 446 PRINTS DnaJ domain signature 148 167 IPR001623 -
Pte15g01468 446 PRINTS DnaJ domain signature 111 126 IPR001623 -
Pte15g01468 446 PRINTS DnaJ domain signature 93 111 IPR001623 -
Pte15g01468 446 Pfam DnaJ C terminal domain 201 414 IPR002939 -
Pte15g01468 446 SUPERFAMILY Chaperone J-domain 90 190 IPR036869 -
Pte15g01468 446 FunFam Chaperone protein dnaJ 1, mitochondrial 335 442 - -
Pte15g01468 446 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 215 291 IPR036410 -
Pte15g01468 446 SUPERFAMILY HSP40/DnaJ peptide-binding domain 280 342 IPR008971 GO:0006457|GO:0051082
Pte15g01468 446 ProSitePatterns Nt-dnaJ domain signature. 133 152 IPR018253 -
Pte15g01468 446 SMART dnaj_3 90 148 IPR001623 -
Pte15g01468 446 Gene3D - 200 330 - -
Pte15g01468 446 ProSiteProfiles Zinc finger CR-type profile. 215 293 IPR001305 GO:0031072|GO:0051082
Pte15g01468 446 CDD DnaJ_C 199 417 - -
Pte15g01468 446 FunFam Chaperone protein dnaJ GFA2, mitochondrial 88 200 - -
Pte15g01468 446 Gene3D - 228 288 - -
Pte15g01468 446 Hamap Chaperone protein DnaJ [dnaJ]. 88 444 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Pte15g01468 446 Gene3D DnaJ domain 88 199 IPR036869 -
Pte15g01468 446 SUPERFAMILY HSP40/DnaJ peptide-binding domain 339 425 IPR008971 GO:0006457|GO:0051082
Pte15g01468 446 ProSiteProfiles dnaJ domain profile. 91 156 IPR001623 -
Pte15g01468 446 CDD DnaJ 91 145 IPR001623 -
Pte15g01468 446 Pfam DnaJ domain 91 153 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01468 Pte-Chr15 11770970 11777945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01468 84 153 C2H2 Transcription Factor Family AT1G74250 42.667 5.06e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01468 K03686 - gmx:100799735 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01468 15 11770970 11777945 Pte15g01468 15 11770970 11777945 RCT