Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01463 ATGAGCAGCTTGTATGGTCCAATTAGATATTCAGAAGAGGAACTGAGGAAGAATACAGAATTCATGGACTCGAGAGATTACCATCAACAACATATTCATCATTATAATTCTGGTCTGGTGCGGATTAGAAGTGATGAGCAAGCCATTAGAAGTGAGGATGATCATCCTTATTCTCAAACATTAAGCTCAGAAACAGAAACCTTATTGGCTAAGTTCATGTCCTCAAGCAACGGATGGAGTCATTCTGATTCCTTCATAGGAGATAATTCTGTCAAGCAAGAAGCTATGGAATCTGCTCCACAAGGAGTCCAAAATGGTTATGCTTATGAACCTCATATGAGTTATCAGCCTCAAGCTTCAGGGTATCCAAATCTTAATTTCAATGCTAGAAATCATTTTGACGGATCATTTAGTATGCAGAACTCTTTGGACGTTCCTGAATATGCATTGCAGCCTGAAATGGATTCCAGAAATAGCTCCAGTCTTATTAGGCAGAATAGCTCACCGCCTGGATTTTTCAGTAAATCAATAGTTGAAAATGGTTTTGCTGGATTGACACAGATGGGTGGATCAAGAGCTTCAGATATCGGAAATGGAGTAGCTAAAGCATCAGCTATTAACGACTGTAAGAGTCGCTACTTATCCAGAGAAAATATAGATGCAGCCGTTCATGAAAGTGGAATCCTGGAAATTTGTGATGGAAACAGAAAAGCCAAGTCTACCGGTTTCGTCAACGACTCTTGGGACAGTGGGGCATTTAGTGGCCTCAAACCAGCTAGAGACAATGATGGGAACATGTTTTATATTTCCAATTCAAAGGAAATTCAGGCCGCAGAAGTGAAACAGCATAATCATGGTTTGTGTAAGCAATTGAGTTGGCCTAGTTCTTCTACGAAGATGGTTTCCGCAGAGAAGCTTTTCCAACTTCAAGGTTCTGTGCAATTTAAGATTCGAGCCAAAAGAGGCTTTGCTACTCACCCAAGAAGCATTGCGGAGAGGATAAGAAGAACACGGATTAGCGAAAAAATTAAGACACTGGAAGGACTTTTCCCAGAAATGGACAAGCAAGCCAAAACAGCTGATAAGTTAGAACTAGCAGTCTGGTATATTAAAGATCTTCAGAAACAAATTAAGATGCTCACATCTGCTAGAGTGAAGTGCACATGTTTAAGTGAACCTGAACAAGATTGA 1191 0.4022 MSSLYGPIRYSEEELRKNTEFMDSRDYHQQHIHHYNSGLVRIRSDEQAIRSEDDHPYSQTLSSETETLLAKFMSSSNGWSHSDSFIGDNSVKQEAMESAPQGVQNGYAYEPHMSYQPQASGYPNLNFNARNHFDGSFSMQNSLDVPEYALQPEMDSRNSSSLIRQNSSPPGFFSKSIVENGFAGLTQMGGSRASDIGNGVAKASAINDCKSRYLSRENIDAAVHESGILEICDGNRKAKSTGFVNDSWDSGAFSGLKPARDNDGNMFYISNSKEIQAAEVKQHNHGLCKQLSWPSSSTKMVSAEKLFQLQGSVQFKIRAKRGFATHPRSIAERIRRTRISEKIKTLEGLFPEMDKQAKTADKLELAVWYIKDLQKQIKMLTSARVKCTCLSEPEQD* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01463 396 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 323 373 IPR011598 GO:0046983
Pte15g01463 396 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 138 390 - -
Pte15g01463 396 Pfam Helix-loop-helix DNA-binding domain 329 374 IPR011598 GO:0046983
Pte15g01463 396 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 326 384 IPR036638 GO:0046983
Pte15g01463 396 Gene3D - 325 390 IPR036638 GO:0046983
Pte15g01463 396 SMART finulus 329 379 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01463 Pte-Chr15 11679670 11682105 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01463 22 379 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 32.552 4.23e-34 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte15g01463 HLH 6.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01463 - - qsa:O6P43_029512 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01463 15 11679670 11682105 Pte15g01463 15 11679670 11682105 RCT