Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01457 ATGGCTCAGAAAACAGAGAAAGAAGAAACAGAGTTCAAAGTCCCTGAAACTATTACCCTTTGTGTTAACAACTGTGGTGTAATCGGCAATCCTGCCACCAATAACATGTGTCAAAACTGTTTCAAAGCTTCCACGACGACGACGACGACACCAACAGCATCTTCGTCTACGATATCGTTGTCATCATCGGCATCGTCTCCTTCTTCCAACTTGGTGGCCGGAATAGCAACATCGATGCAGTTTTCTGCGGAGAGAAGTCCTAGATCCAGGCGACTACGTTCACCGGATAGGCCTAAGGCGTCCTCGTCCTTGACGAGGCAAAACCCAACAGCCGATCGGCCTAAATCGGAGGATTCAACGCAAACGGAGGCGAAGAGGAGCGTGAATAGATGCTCTGATTGCCGGAGAAAGATGGGATTGACCGGTTTCAGATGTCGGTGTGGGGAGTTGTTCTGTTCGGAGCACAGGTATTCCGATCGGCATGACTGTAGCTATGATTACAAAGCTGCAGGACGGGAAGCCATCGCGAGAGAGAACCCGGTCGTCAAAGCAGCCAAGATCGTCAGAGTTTGA 573 0.5009 MAQKTEKEETEFKVPETITLCVNNCGVIGNPATNNMCQNCFKASTTTTTTPTASSSTISLSSSASSPSSNLVAGIATSMQFSAERSPRSRRLRSPDRPKASSSLTRQNPTADRPKSEDSTQTEAKRSVNRCSDCRRKMGLTGFRCRCGELFCSEHRYSDRHDCSYDYKAAGREAIARENPVVKAAKIVRV* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01457 190 PANTHER AN1-TYPE ZINC FINGER PROTEIN 19 189 - -
Pte15g01457 190 MobiDBLite consensus disorder prediction 46 85 - -
Pte15g01457 190 ProSiteProfiles Zinc finger A20-type profile. 15 49 IPR002653 GO:0003677|GO:0008270
Pte15g01457 190 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 20 63 - -
Pte15g01457 190 Gene3D - 99 186 IPR035896 -
Pte15g01457 190 MobiDBLite consensus disorder prediction 111 128 - -
Pte15g01457 190 SMART A20_3 18 42 IPR002653 GO:0003677|GO:0008270
Pte15g01457 190 Pfam AN1-like Zinc finger 131 168 IPR000058 GO:0008270
Pte15g01457 190 MobiDBLite consensus disorder prediction 46 128 - -
Pte15g01457 190 FunFam Zinc finger AN1-type containing 6 100 186 - -
Pte15g01457 190 Gene3D - 1 69 - -
Pte15g01457 190 SMART AN1_Zf_4 131 168 IPR000058 GO:0008270
Pte15g01457 190 ProSiteProfiles Zinc finger AN1-type profile. 125 171 IPR000058 GO:0008270
Pte15g01457 190 FunFam Zinc finger A20 and AN1 domain-containing stress-associated protein 1 1 89 - -
Pte15g01457 190 Pfam A20-like zinc finger 20 42 IPR002653 GO:0003677|GO:0008270
Pte15g01457 190 SUPERFAMILY AN1-like Zinc finger 114 184 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01457 Pte-Chr15 11645684 11647100 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01457 8 191 C2H2 Transcription Factor Family AT3G52800 40.761 2.03e-35 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01457 - - qsa:O6P43_029517 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g01041 19 10058639 10060449 Pte15g01457 15 11645684 11647100 RCT
Pte15g01457 15 11645684 11647100 Pte15g01457 15 11645684 11647100 RCT