Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01456 ATGGATCATAAGGAAACTGGATGTCAGGCACCTCCTGAAGCCCCTAAACTTTGTGCCAATAATTGTGGATTTTTTGGAAGTGCCGCAACCATGAACTTGTGTTCAAAATGCCACAAGGACTTGTTTCTGAAGCAGCAACAGGCTGAGCTTGCAGCATCATCGATAGGAAATATTGTGAATGGCAATGCCAGTGGCTGTGTTAAGGAGCCTGTTGCTTGTCCAGATGTGGAAGTTGGTTCTGGAGGCTCTGTAATGATCGCAGATCAGGCTTCAGTTACTACTACTGCTTTAGACGTGAAATCTGAGCCAACGGTGCTAGAGTCTGCAAAACCAAATAGGTGCAGTACTTGCCGGAAGCGAGTAGGTCTCACGGGGTTCAATTGTAGGTGTGGAAATGTGTTCTGTGCTGCTCATCGCTACTCTGAGAAACACGGTTGCCCATATGACTACCGCACTGCTGGGCAAGATGCTATTGCAAAAGCCAGTAGTGAAGGCTGA 498 0.4739 MDHKETGCQAPPEAPKLCANNCGFFGSAATMNLCSKCHKDLFLKQQQAELAASSIGNIVNGNASGCVKEPVACPDVEVGSGGSVMIADQASVTTTALDVKSEPTVLESAKPNRCSTCRKRVGLTGFNCRCGNVFCAAHRYSEKHGCPYDYRTAGQDAIAKASSEG* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01456 165 Gene3D - 3 62 - -
Pte15g01456 165 ProSiteProfiles Zinc finger AN1-type profile. 108 154 IPR000058 GO:0008270
Pte15g01456 165 FunFam Zinc finger AN1-type containing 6 87 163 - -
Pte15g01456 165 Pfam A20-like zinc finger 17 39 IPR002653 GO:0003677|GO:0008270
Pte15g01456 165 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 53 - -
Pte15g01456 165 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 161 - -
Pte15g01456 165 Gene3D - 88 164 IPR035896 -
Pte15g01456 165 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Pte15g01456 165 SMART AN1_Zf_4 114 151 IPR000058 GO:0008270
Pte15g01456 165 Pfam AN1-like Zinc finger 114 150 IPR000058 GO:0008270
Pte15g01456 165 SUPERFAMILY AN1-like Zinc finger 103 159 IPR035896 -
Pte15g01456 165 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01456 Pte-Chr15 11639501 11639998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01456 4 162 C2H2 Transcription Factor Family AT3G52800 43.353 3.33e-34 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01456 - - qsu:111994215 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01456 15 11639501 11639998 Pte15g01456 15 11639501 11639998 RCT