Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01447 ATGAGATTTCAGTGCACTTTTTTGTACAAGATGAATGGAAATAGACAAATGGAGCTCCACTACATAGATACTGGCTTTCCTTACACTGTCACCGAAAGTTTTATGGATTTCTTTGAAGGTCTCACTCATGTTCCTGTCAATTACGCTGATTCTGGATCAATGCTGGATCAGGAAAGTGTCTATTGGTCCATGAATATGAACCCATATAAATTTGCGATGTCTGGTCCAGGAAGTACATCTTACTATGCTCCTTATGAGGTGAATGATCAGTTACCAAGAATGGAAGTCAGTAGAGAAGACTGGGAAATTTCTTCACTGACAAATGAAGAACCTACCACCACATACTCGCTGCCCGGAAGAGAATCAACTTCGGTTATGCATGCTATCCCTGAAGAATGTAGTCCAAACCATCATGAATCTAGTAGTCCTGAGGTTGTATGGCAAGACAACATTGATCCTGACAATATGACCTATGAGGAACTGCTTGACTTGGGTGAGGCAGTTGGAACTCAAAATAGAGGCTTATCCCAAGAACTTGTCGGTTTACTCCCAATCTCAAAATTCAAATTTGGAGACTTGTTCAAAAGAAAAAACTCTGGAAAGAGATGTGTCATTTGCCAGATGACATACAGAATTGGTGACCAGCAAATAAAGTTGCCATGCGGGCATGTATACCATGCTGAATGCATTACTAAATGGCTTAGCATTAACAAGAAATGCCCAGTTTGCAACATTGAGGTGTTTGGTGACGAATCAAAGCACTGA 765 0.4065 MRFQCTFLYKMNGNRQMELHYIDTGFPYTVTESFMDFFEGLTHVPVNYADSGSMLDQESVYWSMNMNPYKFAMSGPGSTSYYAPYEVNDQLPRMEVSREDWEISSLTNEEPTTTYSLPGRESTSVMHAIPEECSPNHHESSSPEVVWQDNIDPDNMTYEELLDLGEAVGTQNRGLSQELVGLLPISKFKFGDLFKRKNSGKRCVICQMTYRIGDQQIKLPCGHVYHAECITKWLSINKKCPVCNIEVFGDESKH* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01447 254 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 14 250 IPR033276 GO:0004842|GO:0016567|GO:0046621
Pte15g01447 254 ProSiteProfiles Zinc finger RING-type profile. 203 244 IPR001841 -
Pte15g01447 254 SUPERFAMILY RING/U-box 202 248 - -
Pte15g01447 254 FunFam E3 ubiquitin ligase BIG BROTHER 165 248 - -
Pte15g01447 254 SMART ring_2 203 243 IPR001841 -
Pte15g01447 254 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 165 248 IPR013083 -
Pte15g01447 254 Pfam Ring finger domain 202 244 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01447 Pte-Chr15 11555650 11560044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01447 11 255 C3H Transcription Factor Family AT3G63530 53.012 1.19e-97 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01447 K19045 - qsa:O6P43_029532 396.356