Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01443 ATGATTCGGAAAAACATTGTTTTGACTGCTGTTTCGGTCATTCTTGTTATTGGTCTTGCAATCGGTATTGTGTTTGAAATTCAACATTTGAACAGTATCAGTGATAAACGAGATGACAAGGATCTCTCAAACCGTAAAAATGCTGTTGCTTCGCTGTGTAAGAAAACAGATGATGAAGAGCTTTGCCATCAAACCCTTGATCCTGTAAATAGCACTCACCCCATGGACTACATCAAGGCTGCAGTGCAAGCAACAATGGATCAAGTTATCAAATCGTTGAACAAGTCTGATAGGCTTGTAATTCAAGCTAGCCATAGTCCGCGAACTAAAATGGCTATTGAGGATTGTAAGGAATTGCTGAAGTCTGCTAAGCATGAACTTCAATCCATATTATCCACCGACGGTGATAGTAATGATCTGCAAAAAATGCATGATAGTTCATACCACTTTAAGGTCTGGTTGAGTGCTGTGATCTCATACCAGCAGTCATGCCTCGATGGATTTGGAGAAGATGCAAAGATTGACCAGAATTTCTTGGAAGACATGAAAGCTGGGGGTTTGCTTGATGCTGGCAAACTTACTAGCTTATCACTTGCTATAGTTCATGAGGTCTCGGATAGCCTTCAATCACTAGGGTTCAAAGTTGATGTAAAGCGTGGCTCTCGTCGTCTTCTAGTGACAGAAAAATATGATTATCCAACCTGGTTTTCTGGTCGCGACCTCCTTCAAGTCATTGGCAATGGAAGAATGGTGCCTGATGCAGTTGTAGCCAAGGATGGCAGTGGTCAGTACAACACTATCAATGATGCGCTTGCTGCTATCCCTCCGAACAACGTCAACAGATATGTGATCTATGTCAAGGCTGGAATCTACGACGAGAATGTGATTGTTAGAACTGCAAGTATAATCATGTATGGTGACGGCCCTGGTAGGACCGTTGTCACCGGCAGCAGGAGCAACCACAAAGGCTGGTCAACTTTGGAGTCCGCCACTTTCTCTGCTGAGGCAAATGGATTCATTGCTAAGGATATTGAATTCCGAAACACAGCTGGACCTGATCAAGGTCAAGCAGTGGCACTCAGAGTCAAAGGAGATATGTCAGCTTTCTTCAACTGCAGGATGGATGGTTATCAAGACACCTTATGGGTTCAAGCCAAGCGTCAATTCTACCGTGACTGTGTCATCTCTGGCACAATTGACTTCATCTTCGGCGACTCTTTTGCTATCATTCAAAACTCTCAGATCATTGTTAAGAGGCCAGCTGATGGACAATTCAACCTCATAACAGCACAAGGTAGATATGATCCGCGCGAACCAACAGCCATTGTTATACACAGCTGTAAAATCATTGCAGACCAGAGCTTGATCCGCGATCAGCTCCATTTCAAGAGCTACTTGGGAAGACCATGGAAGCACTTGGCAATGACAGTCATTATGGAATCTGACTTGGGAGGGTTTATTGATCCACAAGGATGGTCACCTTGGAACGAGACTACTCCTCCTTCTGACTTATTATTCTACGCTGAGTATGCCAATACTGGACCAGGTGCTTCTGTCAATGGCAGGGTGAACTGGAAGGGTTTCCATGTGATTGACAAAGCTACTGCTCAACAGTTTGCTCCTGGCCCTTACCTTGAAGCAAGCGGCATATGGTTGAAAGACACTGGTTTTCCTGTCCAGTATGAATTGATCTAA 1695 0.4413 MIRKNIVLTAVSVILVIGLAIGIVFEIQHLNSISDKRDDKDLSNRKNAVASLCKKTDDEELCHQTLDPVNSTHPMDYIKAAVQATMDQVIKSLNKSDRLVIQASHSPRTKMAIEDCKELLKSAKHELQSILSTDGDSNDLQKMHDSSYHFKVWLSAVISYQQSCLDGFGEDAKIDQNFLEDMKAGGLLDAGKLTSLSLAIVHEVSDSLQSLGFKVDVKRGSRRLLVTEKYDYPTWFSGRDLLQVIGNGRMVPDAVVAKDGSGQYNTINDALAAIPPNNVNRYVIYVKAGIYDENVIVRTASIIMYGDGPGRTVVTGSRSNHKGWSTLESATFSAEANGFIAKDIEFRNTAGPDQGQAVALRVKGDMSAFFNCRMDGYQDTLWVQAKRQFYRDCVISGTIDFIFGDSFAIIQNSQIIVKRPADGQFNLITAQGRYDPREPTAIVIHSCKIIADQSLIRDQLHFKSYLGRPWKHLAMTVIMESDLGGFIDPQGWSPWNETTPPSDLLFYAEYANTGPGASVNGRVNWKGFHVIDKATAQQFAPGPYLEASGIWLKDTGFPVQYELI* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01443 564 Gene3D - 247 563 IPR012334 -
Pte15g01443 564 FunFam Pectinesterase 4 250 563 - -
Pte15g01443 564 ProSitePatterns Pectinesterase signature 2. 395 404 IPR033131 -
Pte15g01443 564 Gene3D Invertase/pectin methylesterase inhibitor family protein 44 205 IPR035513 -
Pte15g01443 564 FunFam Pectinesterase 45 205 - -
Pte15g01443 564 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 47 203 IPR035513 -
Pte15g01443 564 SMART PMEI_2 44 200 IPR006501 GO:0004857
Pte15g01443 564 PANTHER PECTINESTERASE 16 553 - -
Pte15g01443 564 Pfam Plant invertase/pectin methylesterase inhibitor 48 200 IPR006501 GO:0004857
Pte15g01443 564 ProSitePatterns Pectinesterase signature 1. 278 297 IPR018040 -
Pte15g01443 564 CDD PMEI-like_3 51 205 - -
Pte15g01443 564 Pfam Pectinesterase 253 547 IPR000070 GO:0030599|GO:0042545
Pte15g01443 564 NCBIfam pectinesterase inhibitor domain 42 175 IPR006501 GO:0004857
Pte15g01443 564 SUPERFAMILY Pectin lyase-like 253 558 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01443 Pte-Chr15 11523987 11525761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01443 49 563 Carbohydrate Esterase AT2G26450 41.620 1.05e-127 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01443 K01051 - twl:119983460 523.087