Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01437 ATGATTCAGAAAAGGATTATTTTTTCTGCAGCTGCAGTCGGTATTGTCGTTGGTCTGATAATTGCTCTTCTGGTTGAAATTCAAAAGCACAGCAGCAGCGAATTAGGTTATGGCGATGATCTAGCGCTGATCTCGAGACGGAACAATGCTCTGAATGCAATGTGTAAGAAAACAGATGATGAAAAGTTTTGTCATCATACCCTTGATTCTGTAAACAGCACTGACCCCAAGGACTACATCAAGGCTGCAGTCCAAGCAACATTGGACCAAGTTATCAAATCATCTAACGTTTCTGATTTGCTTGCACTTAAAGCTAAGCGTACCCCAAGGACCAAAATGGCCATTGAGGATTGCAAGGTCTTGCTGCAATCTGCTAAGTATGAACTTGAAACTATTATATCGCTTGCAGGAGGTAGTGATGACGTGCAGGGTCGTTCCTACGAATTTAAGGTCTGGTTGAGCGCTGTGATTTCATTCCAGCAATCATGCATTGATGGTTTTGGAGAAGATGCGAAAATTGATCAGAAGTTCTTGAAAGACATGATAAAGAATGGTTTGCTTGATGTTGGCAAACTCACTAGCTTGGCACTTGCTGTTGTTGATGAGTTGCCTGCATCCTTTAATTTTGAAGCCGATGAAAGTGCTGCTTCTCATTCTCGTCGTCTTCTAGTAATAGAAAAAGATCATGATTATCCAACTTGGTTTTCTGCTATCAGTCGTGACCTCCTTGCTGTGGATGGCAATGGAGGAAAGACACCCAATGCAGTTGTAGCCAAGGATGGCAGTGGTCAATTTAACACCATCAATGATGCACTTGCTGCTATCCCTTTGAACCGTGTAGTCAGATATGTGATCTATGTTAAGGCTGGAATCTACGATGAGAACGTCATTGTTAATAATATCAATGTAACCTTGTATGGTGATGGCCCTGATAAGACCATTGTCACCGGAAACAAGAGCAGAAAAAAGGGTTGGTCCACTTTGCAGTCCTCTACTTTCTCTGCTGAGGCAAAAGGATTCATTGCTAAGGATATGGGATTTCAAAACACTGCTGGACCTGATCAAGGTCAAGCAGTGGCACTCAGAGTCAAAGGAGATATGTCAGCTTTCTTCAACTGCAAAGTGGATGGTTATCAAGACACCTTATGGGTTCAGGCCGATCGTCAATTCTACCGTGACTGTGTCATCTCCGGCACTATCGATTTCATTTTTGGAGACTCTGTTGCTTTCATCCAGAACTCTCATATCATTGTTAAGAGACCAGCAGCTAGACAATACAACGTTGTCACAGCACAAGGTAGAACAGACCTCCGTGCGCCAACAGCAATTGTCATACACAGTTGTAAGGTAGTTGCAGAAGACAGTTTGATTCGAGATCAGCTTCAATTCAAGAGCTACTTGGGGAGGCCATGGAAGGCATTAGCAGCAACAGTCATTATGGAATCTGACTTGGGAGGGTTTCTTGATCCAGAAGGATGGACTCCTTGGAATGCAACGACCCCTCCTTCTGATTTCTTGTTCTATGCTGAGTATGCGAATACAGGACCTGGTGCTGCTGTCCATGGCAGAGTGAACTGGAAAGGTTTCCACGTGATTGACAAGGCTACTGCTCTAAAATTCACTCCTTGTTTTTTCCTTGAACCAAGTGGCATCTGGTTGAAGCAGACCGGTGTTCCTATCCAGTATGAATTGGAAAACTGA 1701 0.435 MIQKRIIFSAAAVGIVVGLIIALLVEIQKHSSSELGYGDDLALISRRNNALNAMCKKTDDEKFCHHTLDSVNSTDPKDYIKAAVQATLDQVIKSSNVSDLLALKAKRTPRTKMAIEDCKVLLQSAKYELETIISLAGGSDDVQGRSYEFKVWLSAVISFQQSCIDGFGEDAKIDQKFLKDMIKNGLLDVGKLTSLALAVVDELPASFNFEADESAASHSRRLLVIEKDHDYPTWFSAISRDLLAVDGNGGKTPNAVVAKDGSGQFNTINDALAAIPLNRVVRYVIYVKAGIYDENVIVNNINVTLYGDGPDKTIVTGNKSRKKGWSTLQSSTFSAEAKGFIAKDMGFQNTAGPDQGQAVALRVKGDMSAFFNCKVDGYQDTLWVQADRQFYRDCVISGTIDFIFGDSVAFIQNSHIIVKRPAARQYNVVTAQGRTDLRAPTAIVIHSCKVVAEDSLIRDQLQFKSYLGRPWKALAATVIMESDLGGFLDPEGWTPWNATTPPSDFLFYAEYANTGPGAAVHGRVNWKGFHVIDKATALKFTPCFFLEPSGIWLKQTGVPIQYELEN* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01437 566 Gene3D - 252 566 IPR012334 -
Pte15g01437 566 CDD PMEI-like_3 53 205 - -
Pte15g01437 566 PANTHER PECTINESTERASE 20 554 - -
Pte15g01437 566 Pfam Plant invertase/pectin methylesterase inhibitor 50 198 IPR006501 GO:0004857
Pte15g01437 566 NCBIfam pectinesterase inhibitor domain 47 200 IPR006501 GO:0004857
Pte15g01437 566 ProSitePatterns Pectinesterase signature 2. 396 405 IPR033131 -
Pte15g01437 566 FunFam Pectinesterase 4 251 564 - -
Pte15g01437 566 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 203 IPR035513 -
Pte15g01437 566 SUPERFAMILY Pectin lyase-like 253 560 IPR011050 -
Pte15g01437 566 SMART PMEI_2 46 199 IPR006501 GO:0004857
Pte15g01437 566 Pfam Pectinesterase 254 547 IPR000070 GO:0030599|GO:0042545
Pte15g01437 566 Gene3D Invertase/pectin methylesterase inhibitor family protein 46 204 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01437 Pte-Chr15 11477144 11479075 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01437 51 564 Carbohydrate Esterase AT4G33230 43.152 1.12e-126 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01437 K01051 - twl:119983460 521.931