Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01407 ATGGAGAAATATCTTAGAGACAACTTCGACGTCGAACATAAAAGACCTTCAGAGGAAGCTTTGAGGAGATGGAGATCTGCTGTAGCCGTCGTCAAGAATCCTCGCAGGCGATTCCGTATGGTCGCCGATCTCACCAAGCGTGCGGAGGCTCAACGCAAACGCAGGAAAATACAGGAGAAGCTCCGCGTAGCTCTTTATGTACAGAAAGCAGCATTACAATTTATCGCCGCTGGAAAGTATCGCGGCAGGTACATGCTGACCAAGGAGGTAAAAGATGCCGGGTTTGGCGTTGAACCTGATGAACTCGCCTCTATTACTGAATCTCGCGATAACAAAGCTTTAGAACATTTCGGAGGAGTTGAAGGAATAGCAAGAGAGTTATCTGTTTCTTTGAAGAATGGAATCAACTCAGGGAATGTATCTTGCAGACAACGTATTTTTGGCTTTAATCATGTCCCTGAGAAGCCTCCTAGGAACATTTGGATGTTTATCTTTGATGCAGTGCAGGACTTGACTTTGATTATTCTCATGATATGCGCCGTTGTTTCTGTAGGTGTTGGAATTGCTACAGAAGGGTTGCCAGAAGGTATGTATGATGGAGTAGGAATATTGTTATCTATACTTTTAGTGGTCATAGTCACTGCAGTAAGTGATTATAAGCAGTCGTTGCAATTCAAGGATTTGGATAAGGAGAAGAAGAATATTACCATGCAAGTCACTAGGGATGGAACTAGAAAACACGTCTCAGTTTATGAATTAGCGGTTGGAGATGTAGTCCATCTGTCAATTGGTGATATAGTTCCTGCAGATGGGCTGTACATTTCAGGATACTGCTTATCTGTCGATGAATCAAGTTTGTCAGGTGAGAGCGAGGCAATAAATATAAATCAAGAGAATCCTTTTCTTCTATCTGGTACCAAAATTCAAGATGGGTCTGCAAAAATGTTGGTGACTTCTGTGGGTACGAGGACTGAATGGGGAAGGTTGATGTCCACACTGGATGAAGGAGGAGTTAATGAGACACCGTTACAGGTCAAATTGAATGGAGTTGCCACCGTCGTTGGAAAAATTGGCTTGGCCTTTTCTGTGCTGACCTTTTTAGTCTTGACTGGAAGGTTTTTAGTGCAGAAAGCTATGGATGATAGGATCAACATATGGAACTTGGATGACGCGAGGCGGCTCCTTTACTTCTTTGCCACGGCTGTGATTATTATTGTTGTTGCAGTTCCAGAGGGACTTCCTTTAGCAGTGACATTAAGTCTTGCCTTTGCAATGAAGAAATTGATGAATGATAAAGCACTGGTGAGGCACCTCTCTGCGTGTGAGACAATGGGCTCTGCCAGTTGTATATGCACAGATAAGACTGGGACTTTAACAACAAACCATATGATAGTAAACAAAATATGGATTGCCGAAAAAAACATAGCGATAAAAGGTAATGACAATGGGAGTGCACTGAAATCCTCAGTAGCTGGGGAAGTTCTTAATATTCTTATGCAATCTATATTTCAGAATACTGGTGCTGAAGTTGTCAAGGGGACTAACGGAGAGAATAAGATAATGGGTTCTCCTACAGAGACAGCAATTATAGAATTTGGCTTGCTTTTGGGAGGTGATCCCAGGTCTTATGGCGAGGAGTACAAGATAGTGAAGGTTGAACCTTTCAATTCAATCAAGAAAAAGATGTCTGTTCTAGTGTCTCTACCAGGTACTGATGGCTTTAGAGCATTCTGCAAAGGAGCATCAGAAATAGTACTAAAAATGTGCGATAAATTTATTCGAACTGATGGGGTTGCAGCCCCTCTATCGGAGAATCAAAGGAAGAATATCACAAATATCATAAATGGTTTTGCTTCTGAAGCTTTAAGAACTCTCTGCCTGGCTTTAAGGGATATAAAAGGTCACTCTCGTTCTGACAATATTCCCGAAGAAAATTATACATTAATTGCAGTTGTTGGAATCAAGGATCCAGTACGTCCAGGAGTTAAAGAAGCTGTCAAGACTTGTTTAGATGCTGGGATAATTGTCAGGATGGTTACTGGGGATAATATTCATACTGCTAAAGCTATAGCCAAAGAATGTGGCATCTTGACTGATGGTTTAGCTATAGAAGGTGCAGAGTTTCGTAATATGGACACGCAGCAGATGCAGGAGGTGCTACCAAAGCTACAGGTAATGGCTCGCTCTTCACCTTCAGACAAGCACACCTTAGTGACACACCTCAGAAACGAGTGTAACCAAGTTGTTGCAGTGACTGGCGATGGAACCAATGATGCCCCAGCGTTGCATGAGGCAGACATTGGACTTGCTATGGGTCTAGCTGGGACAGAGGTTGCAAAAGAAAATGCAGATGTCGTTGTTCTGGATGACAATTTTACAACAATAGTGAGTGTTGCTAGATGGGGGCGTTCTGTTTATATCAACATTCAGAAATTTGTGCAGTTCCAATTGACAGTGAACATCGTTGCTCTCGTGCTCAATTTTGTTTCTGCATGTGTTTCAGGATCTGCTCCTCTTACTGCTGTGCAAATGCTCTGGGTAAATATGATCATGGACACATTAGGTGCATTAGCCCTTGCAACAGAACCCCCTCATGATGGTCTAATGAAAAGACCACCTGTTGGAAGGAATGTTCGCTTCATAAATGGAATAATGTGGAGGAATATAATTGGTCACAGCATCTATCAGATTATTATACTTTTGGGTCTCGAGTTTGGGGGTGAACGTATTCTGCACCTCAGCGGTCCACGTGCTACTTCTGTTCTCAACACATTCATATTCAATACTTTTGTCTTTTGCCAGATTTTTAATGAGATGAACAGCCGTGACATGGAGAAGATTAATGTTTTCAGAGGCATATTCAGCAGCTGGGTTTTTATTGCTGTCATGATCACAACCATTTGCTGCCAAGTCATAATAGTCGAATTTTTGGGCGCCTTTGCAAAGACAGTTCCATTGAGCTGGGAGTTGTGGTTAGCCAGTGTTGTGATTGGAGCTGTAAGTTTAATTGTGTCAGTTATCCTCAAATTTATTCCTATCACATCTTCAGATTGCACAACCAAACCTCACGATGGTTACGAACCGCTGCCTAGTGGTCCCGAGCAGGTATAA 3111 0.4233 MEKYLRDNFDVEHKRPSEEALRRWRSAVAVVKNPRRRFRMVADLTKRAEAQRKRRKIQEKLRVALYVQKAALQFIAAGKYRGRYMLTKEVKDAGFGVEPDELASITESRDNKALEHFGGVEGIARELSVSLKNGINSGNVSCRQRIFGFNHVPEKPPRNIWMFIFDAVQDLTLIILMICAVVSVGVGIATEGLPEGMYDGVGILLSILLVVIVTAVSDYKQSLQFKDLDKEKKNITMQVTRDGTRKHVSVYELAVGDVVHLSIGDIVPADGLYISGYCLSVDESSLSGESEAININQENPFLLSGTKIQDGSAKMLVTSVGTRTEWGRLMSTLDEGGVNETPLQVKLNGVATVVGKIGLAFSVLTFLVLTGRFLVQKAMDDRINIWNLDDARRLLYFFATAVIIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMIVNKIWIAEKNIAIKGNDNGSALKSSVAGEVLNILMQSIFQNTGAEVVKGTNGENKIMGSPTETAIIEFGLLLGGDPRSYGEEYKIVKVEPFNSIKKKMSVLVSLPGTDGFRAFCKGASEIVLKMCDKFIRTDGVAAPLSENQRKNITNIINGFASEALRTLCLALRDIKGHSRSDNIPEENYTLIAVVGIKDPVRPGVKEAVKTCLDAGIIVRMVTGDNIHTAKAIAKECGILTDGLAIEGAEFRNMDTQQMQEVLPKLQVMARSSPSDKHTLVTHLRNECNQVVAVTGDGTNDAPALHEADIGLAMGLAGTEVAKENADVVVLDDNFTTIVSVARWGRSVYINIQKFVQFQLTVNIVALVLNFVSACVSGSAPLTAVQMLWVNMIMDTLGALALATEPPHDGLMKRPPVGRNVRFINGIMWRNIIGHSIYQIIILLGLEFGGERILHLSGPRATSVLNTFIFNTFVFCQIFNEMNSRDMEKINVFRGIFSSWVFIAVMITTICCQVIIVEFLGAFAKTVPLSWELWLASVVIGAVSLIVSVILKFIPITSSDCTTKPHDGYEPLPSGPEQV* 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01407 1036 Pfam Cation transporter/ATPase, N-terminus 115 183 IPR004014 -
Pte15g01407 1036 CDD P-type_ATPase_Ca_PMCA-like 143 885 - -
Pte15g01407 1036 FunFam Calcium-transporting ATPase 650 797 - -
Pte15g01407 1036 PRINTS H+-transporting ATPase (proton pump) signature 752 768 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte15g01407 1036 PRINTS H+-transporting ATPase (proton pump) signature 610 628 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte15g01407 1036 PRINTS H+-transporting ATPase (proton pump) signature 784 809 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte15g01407 1036 PRINTS P-type cation-transporting ATPase superfamily signature 451 465 - -
Pte15g01407 1036 PRINTS P-type cation-transporting ATPase superfamily signature 752 771 - -
Pte15g01407 1036 PRINTS P-type cation-transporting ATPase superfamily signature 650 661 - -
Pte15g01407 1036 PRINTS P-type cation-transporting ATPase superfamily signature 776 788 - -
Pte15g01407 1036 PRINTS P-type cation-transporting ATPase superfamily signature 282 296 - -
Pte15g01407 1036 PRINTS P-type cation-transporting ATPase superfamily signature 672 682 - -
Pte15g01407 1036 SUPERFAMILY HAD-like 450 857 IPR036412 -
Pte15g01407 1036 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Pte15g01407 1036 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 457 662 IPR023299 GO:0000166
Pte15g01407 1036 Pfam haloacid dehalogenase-like hydrolase 449 766 - -
Pte15g01407 1036 NCBIfam HAD-IC family P-type ATPase 388 476 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte15g01407 1036 NCBIfam HAD-IC family P-type ATPase 718 840 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte15g01407 1036 SFLD p-type atpase 433 804 IPR044492 -
Pte15g01407 1036 Gene3D - 461 657 IPR023299 GO:0000166
Pte15g01407 1036 SUPERFAMILY Calcium ATPase, transduction domain A 235 332 IPR008250 -
Pte15g01407 1036 FunFam Calcium-transporting ATPase 214 334 - -
Pte15g01407 1036 PANTHER CATION TRANSPORTING ATPASE 64 1013 - -
Pte15g01407 1036 Pfam E1-E2 ATPase 235 429 - -
Pte15g01407 1036 NCBIfam calcium-translocating P-type ATPase, PMCA-type 111 1013 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pte15g01407 1036 SFLD C1.7: P-type atpase like 433 804 - -
Pte15g01407 1036 Pfam Cation transporting ATPase, C-terminus 837 1011 IPR006068 -
Pte15g01407 1036 Gene3D - 166 1011 - -
Pte15g01407 1036 Gene3D - 448 797 IPR023214 -
Pte15g01407 1036 SMART Cation_ATPase_N_a_2 116 188 IPR004014 -
Pte15g01407 1036 FunFam Calcium-transporting ATPase 461 657 - -
Pte15g01407 1036 Gene3D - 134 334 - -
Pte15g01407 1036 Gene3D - 16 76 - -
Pte15g01407 1036 ProSitePatterns E1-E2 ATPases phosphorylation site. 453 459 IPR018303 -
Pte15g01407 1036 FunFam Calcium-transporting ATPase 16 76 - -
Pte15g01407 1036 FunFam Calcium-transporting ATPase 769 1015 - -
Pte15g01407 1036 SUPERFAMILY Calcium ATPase, transmembrane domain M 115 1013 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01407 Pte-Chr15 10994764 11000047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01407 57 1033 Primary Pumps ATPases AT3G57330 67.587 0.0 1342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01407 K01537 - qsa:O6P43_001417 1598.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01407 15 10994764 11000047 Pte15g01407 15 10994764 11000047 RCT