Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01396 ATGGTTCAGAAGAACATTCCTTCCAAGCTTGGAATCCAGGCTAGCCATGTTAAATCTGACAAGCACTTGGCAAAACTTAAACCAAGCCCCTCTCAGTACCAAGATGGGAAAAATAGAACAGCTGAAATGAAGAAGATGAAGTCAAGATCACTCAAGCTTTCAGACTTACAGGGTTATAGTTCATCATCATCTATGAGGAGAAACATATCTCAGCCAGGAAAACCGCCACCTCTCCAGGTCACAGCTTCTGCAACTGGCTCACCACAGAAGCAGCAACCATTGATGAGAGCTACAGATGGCTCGCCAAACTATATGAAGTCAACTAGCAGTTCAAATGCAAAGAAGGAGCTTTCCTTGGTGAGTGTTCGGAGTACTCAATCTGATTTTGTATGTAATAAAAGGTGGAAAAACAAACTGAGCAATCCAACACTTGATTCTGTTACAAAACCAGCTAGAATCTTAACCAAGACTTGTAGTTTGAAGAAGGTGAGGACTTTGACAAGGACTCCTAGTTTTAAGCTTACAAGAGGTCAAAAGATAAAAACTTCCACAGTTGCTATGAGTGGAGACATAAATTTGGAGAAAGCAACGTGTTCTTCAACTCTGAAAGATTCTAAGTTTCCTGAATACCTTATTCTTAATCCTGGGGGAACTGAATATGAGGGTACTTCTGTCGTCAAGGTTTGCCCTTATAATTATTGTTCTCTAAATGGTCATTACCATACTCCTTTGCCACCACTGAAAAGCTTCTTGTCAGCAAAGAGGCGTGCCTTGAAGACTCTGAAAAGTTTCAAACTTGAGACTCGAAGCCCTCGGAGAGTGAAGGTAACTAAAGATATAAAGAAAGCATCTGATATCCACTCCTTTGATGACAGCCCTGCATATGATGAAGTAGACGTTGGATGTTCCAATAACTCTTCATCAACAGAAGATAATGATATGGAATTTTTTATTCAAATTTGTGCTAAGGACCATGAAGAGGAAGCAATCAAAACCTGTCCACTTGGAGAGGAAATTGGAGAAAGTGATCCTGCTGGAGAACTTGAGGACCAGCATGACATCAACTCCATAAATGGGAAGCAAATTTTTTCAGTATATGGAGAGGAAGATATCATGCAAGTGGTTGCAAGTGTGTCTGATGGCTCACCTAAATCGGAGATTGATTTGGAGGAAGATTTTGACCAAAAACATACTGATATCGAAGCTGGAACTGAGACCAGACATAACTTGGTCGAGGATGAAACTACAGGTGAAGATTGCCGTGACAATACGGCAGAGGGTTCTCAAGCAACTGATATGAAATGGGAGGAAGGATATTTTTCTTTCATACAGCTCAGTTATGAATGTAATATCCCAAACCCAAATGGCAAGATACATGACGCAAACTTTGAGTGCTTGTTGGAAGTTTCTTGTGCTGGTTCTCATGATGAACATACCTTGCTGACAGAGGGCTTCAATAGTATTGACAACAAAGAGAATATGGGGTCTGCATCTGTCCAAGAAGCTTCTCCTGAAGATGTTGGAGCACAATTTGATGGCAATGATGTTGAACCTGAGGGTTTGAGTCTGAAGATGCAGCCTGTAACATACGAAGAGGCCAAGAGTTTCACTTTTGATCAACTTTCTCTATCTGAGTATTCATTTCATGATCTCTCAGATTCAGAAGACATAAGAGAAGAAGTACTGACCTTGGCTTCAAATTTGGCACCGGGGACTTCCCGAGAATTTAGGGAAGGGAATGATGATACTCCTAAAGATGACTTTCAGGTGCCTGGAATTCTTGTAAGATATGTCAATGGCATGGAATGTGACAGAACTCAAGCACCAGGTGTTGTTTTGAGTGATGAATGGTATCGAAAGAGACTAGAAGATAATGGTTCCATTAAATGTTTTAATGACTCGATGTCCAATTCTTCTCATCCCGTTGAGGAATTTGGTCAAGTGAAATCGACGGAAGAACACAGAAATGAAACAATTCAAGCTCTAGAAGAATTTCGAGGAGCTGTAAGTGACACTTCTATTGAAGAAGCGGAACTCAAGGATATCAAGGCTGGAGATGAAGCCAAAGAGGATTCTGCAGAATCAGAAGTTCGTTCGGTGGGAATTCAAAACCATGCGGAATCAGATACTGCAGAATCAGCAGCTGAAGTTGATAATATTATCAGTGCAGATAAAAAGAACACTTTGTTACCAGCTAAAACTGATGCCAGCCAAGAAGTTTCTGACATTTTCTGCAACTGGAAACAACTGAGGAGGGGAACGAGACCTGAAAGTCATGAAGAAGAGCTGAGAAAGTTTAACCCTCGAGCACCGAATTACTTGTCACTGGTTCCTGATCCTGAAGCCGAGAAAGTAGACCTCAAGCATCAGGAAATGGATGAGAGGAGGAACGCAGCAGAGTGGATGATTGATTATGCACTCCAACGAGCTGTCACTAAACTTGCTCCAGCAAGGAAGAGGAAGGTAGCCCTACTTGTGGAAGCTTTCGAAACGGTGAATCCGATACCAAAATATGAAAGCCATCTACGAAACGCATCTGCATTTACTCATCACAGTCTGATGCAAACTTGTAGCTGA 2577 0.4152 MVQKNIPSKLGIQASHVKSDKHLAKLKPSPSQYQDGKNRTAEMKKMKSRSLKLSDLQGYSSSSSMRRNISQPGKPPPLQVTASATGSPQKQQPLMRATDGSPNYMKSTSSSNAKKELSLVSVRSTQSDFVCNKRWKNKLSNPTLDSVTKPARILTKTCSLKKVRTLTRTPSFKLTRGQKIKTSTVAMSGDINLEKATCSSTLKDSKFPEYLILNPGGTEYEGTSVVKVCPYNYCSLNGHYHTPLPPLKSFLSAKRRALKTLKSFKLETRSPRRVKVTKDIKKASDIHSFDDSPAYDEVDVGCSNNSSSTEDNDMEFFIQICAKDHEEEAIKTCPLGEEIGESDPAGELEDQHDINSINGKQIFSVYGEEDIMQVVASVSDGSPKSEIDLEEDFDQKHTDIEAGTETRHNLVEDETTGEDCRDNTAEGSQATDMKWEEGYFSFIQLSYECNIPNPNGKIHDANFECLLEVSCAGSHDEHTLLTEGFNSIDNKENMGSASVQEASPEDVGAQFDGNDVEPEGLSLKMQPVTYEEAKSFTFDQLSLSEYSFHDLSDSEDIREEVLTLASNLAPGTSREFREGNDDTPKDDFQVPGILVRYVNGMECDRTQAPGVVLSDEWYRKRLEDNGSIKCFNDSMSNSSHPVEEFGQVKSTEEHRNETIQALEEFRGAVSDTSIEEAELKDIKAGDEAKEDSAESEVRSVGIQNHAESDTAESAAEVDNIISADKKNTLLPAKTDASQEVSDIFCNWKQLRRGTRPESHEEELRKFNPRAPNYLSLVPDPEAEKVDLKHQEMDERRNAAEWMIDYALQRAVTKLAPARKRKVALLVEAFETVNPIPKYESHLRNASAFTHHSLMQTCS* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01396 858 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 834 IPR044681 GO:0005516
Pte15g01396 858 SMART CaM_binding_2 723 834 IPR012417 GO:0005516
Pte15g01396 858 MobiDBLite consensus disorder prediction 683 714 - -
Pte15g01396 858 MobiDBLite consensus disorder prediction 632 652 - -
Pte15g01396 858 Pfam Plant calmodulin-binding domain 752 833 IPR012417 GO:0005516
Pte15g01396 858 MobiDBLite consensus disorder prediction 53 119 - -
Pte15g01396 858 MobiDBLite consensus disorder prediction 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01396 Pte-Chr15 10918099 10921466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01396 627 843 Calmodulin-binding Proteins AT2G38800 39.526 4.07e-33 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01396 - - jre:108981189 562.377