Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01390 ATGGCAGATGCAGAATTTTTGACAGCAGTGGTGAAATCTCTGACAAGAGATGAGGGAGAAAGGAGGGAAGCTGTTGGTCTCTTGCTTGAACTTTCAAACCTCCCAGCTGTTCGGAGGAGGATCGGAAGAATTCAGGGATGCATTGTTATGCTGGTTGCTATCTTGAATGGAGATGATCCCATTGCTTCTCATAATGCAGCACATTTGTTGAATGCCTTGTCTAGCAGTGCACAAAATGCACTTCATATGGCGGAGGCAGGCTACTTCAAGCCGTTAGTGCAGTACCTCCGAGATGGTGATGCATAA 306 0.4641 MADAEFLTAVVKSLTRDEGERREAVGLLLELSNLPAVRRRIGRIQGCIVMLVAILNGDDPIASHNAAHLLNALSSSAQNALHMAEAGYFKPLVQYLRDGDA* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01390 101 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 1 99 - -
Pte15g01390 101 SUPERFAMILY ARM repeat 5 100 IPR016024 -
Pte15g01390 101 Gene3D - 5 101 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01390 Pte-Chr15 10887997 10888302 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01390 1 99 U-box Gene Family AT1G76390 32.353 4.37e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01390 K08332 - qsa:O6P43_001474 146.362