Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01355 ATGCAGAACACTCCTGTGGCTCTGTCTCATCCTCCTTCCATAACTACAATGCTCAAACTCAAACCTTCAAACAAAAAGACAACACATTACCCACTCTCTCCTCGTTCTTATTGTTCAGTATTACTACTACATCTACCGTCCAACCATGTATTCCCCTCGTCATACTGCACAGCAATTCCTTCCTGCACATTCCGGGATTCTTCTTCTTGTTCGATTTTCCTGCCCCAGAGAAGAGATGAAATCGTTAAGGTACTAGCTGCTTCCCTGTCCGAAAGTGCCGGTGAGACGGTCCAACCCAGTCGTTTGATCCAAGCTTTGAGGCTTGGAGCTATGTTTGGAATTTGGTACATTTTGAACATCTGTTACAATATCTACAACAAACAGGTTCTAAAAGTCTACCCATTTCCAGCAACGGTTACTACTATTCAATTTGCCATTGCTTCTATGGTGATTATGTTCATGTGGAGTTTCAACCTCCACCAGAGACCAAAGATTACGCGTTCACAGCTTGCAGCAATCATTCCTTTGGCTATAGCCCACACATCAGGCAACCTCTTAACCAACGTCAGTCTTGGAAGAGTTGCGGTATCTTTCACTCATACGATTAAAGCTATGGAGCCTTTTTTTACCGTTGTTCTTTCTGTTCTCTTTCTTGGGGAGTGGCCCTCTTTCTGGGTGGTTTCGTCCCTCGTACCACTGGTAGGCGGAGTGGCTTTAGCATCCATGACTGAAGTTTCTTTTAATTGGATTGGATTCTGTAGCGCAATGGCCTCTAACCTGACTAACCAATCGCGTAATGTGCTCAGCAAGAAGTTGATGGTCAAGGAAGAGGAAACCTTGGACAACATCAACCTCTTCTCAGTAATAACCGTAATTTCTTTTATCCTTTTGGTCCCAGTGACCGTATTCATGGAAGGCTTGAGGTTTAGTCCTTCATACCTGCAGTTTGCCGCAAGTCGAGGACTGAATGTCAGAGAGCTTCTTCTGAGGTCAATTTTGGCTGGGTTCTGCTTCCATGCTTATCAGCAGGTCTCATATGGAATTTTGCAAATGGTATCACCTGTTACACATTCAGTTGGGAATTGTGTGAAGCGTGTAGTTGTCATTGTTACGTCTGTGATATTCTTCCAGACTCCTGTCTCAATCGTCAACTCAATTGGTACTGCTACTGCTTTAGTTGGGGTTTTCTTGTATTCAAGGGCAAAGCAGATAAAGACCAAGCCAAAGACATCATAG 1236 0.4393 MQNTPVALSHPPSITTMLKLKPSNKKTTHYPLSPRSYCSVLLLHLPSNHVFPSSYCTAIPSCTFRDSSSCSIFLPQRRDEIVKVLAASLSESAGETVQPSRLIQALRLGAMFGIWYILNICYNIYNKQVLKVYPFPATVTTIQFAIASMVIMFMWSFNLHQRPKITRSQLAAIIPLAIAHTSGNLLTNVSLGRVAVSFTHTIKAMEPFFTVVLSVLFLGEWPSFWVVSSLVPLVGGVALASMTEVSFNWIGFCSAMASNLTNQSRNVLSKKLMVKEEETLDNINLFSVITVISFILLVPVTVFMEGLRFSPSYLQFAASRGLNVRELLLRSILAGFCFHAYQQVSYGILQMVSPVTHSVGNCVKRVVVIVTSVIFFQTPVSIVNSIGTATALVGVFLYSRAKQIKTKPKTS* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01355 411 Pfam Triose-phosphate Transporter family 106 399 IPR004853 -
Pte15g01355 411 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 106 409 IPR004696 GO:0016020|GO:0022857|GO:0055085
Pte15g01355 411 SUPERFAMILY Multidrug resistance efflux transporter EmrE 151 243 - -
Pte15g01355 411 PANTHER SOLUTE CARRIER FAMILY 35 107 405 - -
Pte15g01355 411 SUPERFAMILY Multidrug resistance efflux transporter EmrE 292 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01355 Pte-Chr15 10579662 10582641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01355 83 412 Antiporters AT5G33320 63.939 1.09e-145 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01355 K15283 - cave:132182466 496.893