Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01335 ATGGAAGATGGTGAAGTGGGTGGTAATAAAATCTATGGAGTTGGATATGGAAAAGTAATCGAGCACAAACTTCCCTTCTGCCGAACAGGTCCACCACTAACAGCGATAGATAGATTCTTATGGGGTCAGCGAACCCATTTTCCTCAGGAACCGATTCTCAACAATGCAAAGAACAAAGAAGCAAGCTTGTCCGGAAATGGTTTGTTCAGTTTTGCCCTACCAGGCGGTGCAACCTATGGGTTTGGAGGGCTACACCTCAAAGACACAACCTCAGTTGGTATGCATTTTATGGAAGGAGAGGCTTTGAATTGGAGAGAACAGAAAAACCCTAATTCATTTCTGAGTGCAGATGGAAATATTTTGGACAAGTGTAAAGGTGTCGCAAAAAGAGTCAAGAAATGCTCTCCTGCTTTGATCAAAGGACAGTGGAGTGATGAAGAAGACAGGAAGCTGATTAAGTTGGTTAAGCAATTTGGCGTAAGAAAATGGGCACAGATCGCAGAGAAGCTGGATGGAAGAGCTGGCAAGCAGTGTCGTGAGAGATGGCATAATCATCTTCGGCCTGATATTAAGAAGGACAGTTGGAGCGAAGAAGAAGAAAGGTTACTAGTGGAAACTCATGCCAAGGTTGGAAATCGTTGGGCTGAAATTGCAAAGTGCATCCCAGGAAGGACTGAAAATGCAATAAAGAACCATTGGAATGCCACAAAAAGAAGGCAGAATTCAAGGAGAAAGAACAAGAGGTCGACAGAGATTTCCAATGGTGGAAAGTCTCAACCTTCTATTCTCCAAGACTACATAAGAAGCCAGATGCTTGGTAACACACACAGCCCTTCTGTCATCCACAACTCTTGTCTTAGCTCCACTACCACTGCTACTCCTACCCCATCTTGCTCTACGCTCTCAGAAGACCCCCCAAACCAAATCAATTTCTGGTTGAGTGAACCATCTGAATCTGTCGACGCAGGTGAGGAGTCGTCACTACTTGTTCAACCATATGATGATGAGATCCAATTCATGCAACATCTGTTTGCACCAAATGAGAACAAGCCACCTCTCGTCAACATTGGGACTGAAGCATATTCTGGGGAACAGTCATACAGATCAACCATTTCCTATTCCTTGGGGTCACAGACAAATAAAGGGAATCAGCAGCTTAATGATAATCATGATACGAGTCAATTTGCCATCACCAACTTCACTCCATGTTTTCCAGACAAAACCAAGTACATTAACAGTAAATTCCATGCAAAAGATCAGTCAGCCATCCCCACAACTACACACCTTCGTTCTGATCTCTACCTATCATACCTACTCAATGGCGCTGCGAGTTCATCATTGCCACCTTACTACCGCGATGAAAGCATGAACATAGACGTAAATGTTGGTGATCAAGCTTATCTTTGTAACGGGAAGAAAGAGATGGATTTGATTGAGCTGGTTTCTTCTTCTAAATTCTCTACAGTCAGCAGCAGCAACTGCAGTAATACCTAG 1494 0.4357 MEDGEVGGNKIYGVGYGKVIEHKLPFCRTGPPLTAIDRFLWGQRTHFPQEPILNNAKNKEASLSGNGLFSFALPGGATYGFGGLHLKDTTSVGMHFMEGEALNWREQKNPNSFLSADGNILDKCKGVAKRVKKCSPALIKGQWSDEEDRKLIKLVKQFGVRKWAQIAEKLDGRAGKQCRERWHNHLRPDIKKDSWSEEEERLLVETHAKVGNRWAEIAKCIPGRTENAIKNHWNATKRRQNSRRKNKRSTEISNGGKSQPSILQDYIRSQMLGNTHSPSVIHNSCLSSTTTATPTPSCSTLSEDPPNQINFWLSEPSESVDAGEESSLLVQPYDDEIQFMQHLFAPNENKPPLVNIGTEAYSGEQSYRSTISYSLGSQTNKGNQQLNDNHDTSQFAITNFTPCFPDKTKYINSKFHAKDQSAIPTTTHLRSDLYLSYLLNGAASSSLPPYYRDESMNIDVNVGDQAYLCNGKKEMDLIELVSSSKFSTVSSSNCSNT* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01335 497 CDD SANT 194 237 IPR001005 -
Pte15g01335 497 SUPERFAMILY Homeodomain-like 138 233 IPR009057 -
Pte15g01335 497 PANTHER MYB PROTEIN-RELATED 129 265 - -
Pte15g01335 497 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 135 190 IPR017930 -
Pte15g01335 497 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 191 241 IPR017930 -
Pte15g01335 497 Pfam Myb-like DNA-binding domain 143 203 - -
Pte15g01335 497 CDD SANT 143 186 IPR001005 -
Pte15g01335 497 Gene3D - 193 261 - -
Pte15g01335 497 ProSiteProfiles Myb-like domain profile. 187 237 IPR001005 -
Pte15g01335 497 MobiDBLite consensus disorder prediction 228 262 - -
Pte15g01335 497 FunFam Transcriptional activator Myb isoform A 139 192 - -
Pte15g01335 497 SMART sant 139 188 IPR001005 -
Pte15g01335 497 SMART sant 191 239 IPR001005 -
Pte15g01335 497 Gene3D - 139 191 - -
Pte15g01335 497 ProSiteProfiles Myb-like domain profile. 135 186 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01335 Pte-Chr15 10338378 10340809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01335 30 484 MYB Transcription Factor Family AT5G58850 38.947 2.07e-82 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte15g01335 Myb_DNA-bind_6 1.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01335 K09422 - qsu:111985900 419.853