Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01322 ATGAATAGATTAATATCCACGCCGGTGTCTAAATTCCGTTATTTCCGGCAAAGGGAGGAGGACGACAAGCAACATCTCTGCGCGATCTTATGGCGCTGCCGAGTCCTGAACCCCGGCAGCGATATTGTGAACTATTGGCACAGGGTTTTCTTGTTCACAAGCATGATCGCACTCTTCGTAGACCCTTTGTATTTCTACTTGCCTCATATGGGCGACGAAGGTTGCATGGGAATAGATGGTAGGTTGAAACACTGGGTAACTTTTTTCAGGACCCTCACTGATGTCTTTCAGTGGCTCCACATCGCCATGAAGTTCAGGATCGCCTTTGTTGCTCCCAGCTCTAGGGTCTTTGGCCGTGGTGAACTCGTGAGAGATCCCAAAGAGATTGCTAGACGCTACTTGAGAACTGATTTCATCGTTGATCTTGCGGCATCACTTCCGTTGCCACAGGCATGCCATGCATTCTGTTTTATCTTATTGAACTTTCAAAAATGTTCTTTTGTACATGAATATATTGTGATCTGGATAATTATTCCATCGACTACTGATCATAAATCTGAACATGCCAACAATGCTCTTGCGCTGTTAGTTCTGGTCCAATATATTCCTAGACTGTTTGTTATCTACCCCTTGAATCAGCAGATTGTGAAAACCACTGGCATAGTGGCTAAAACTCCCTGGACAGGAGCTGCGTTTAATCTGGCTTCTTACTTGATAGCGAGTCATGTAATTGGTGCCTCGTGGTATTTATCATCAATAGCACGGCAACTTGCCTGCTGGAATTTGGAGTGCAACAAAGAGAAACACAGCACTGTCCCTTGCTTGCATGTCTATCTAAATTGTGATCATACACACACACTTGAGAGAAAGAATTGGTTAAATGTCACCAGCACTATTTCCAATTGTAATGCAAAGAACAAGGACATCGACTTCAAGTTTGGAATGTTTGCTGCTGCTTTTGAGAACGATGTTGCTTCAACGACCTTTATGAAGAAATATAGCTATTGTCTGTGGTGGGGTTTAAGAAGTCTAAGTTCATATGGACAGGAATTGGACACGACCACATATATAGGCGAGAACTTATTTTGTGTATTTCTAGCCATTACAGGCTTGGGCCTTTTTGCATTACTGATTGGCAATATGCAGAATTATTTGCAATCAATGTCACAAAGAGTTGAAGAATTTAGGATTAAGAAGAAAGATACTGAGGAATGGATGAGGCATCGGCAGTTACCTCCCGATTTGCAAGAACGCGTCCGCAAGTTTGTCGCATACCAATGGCTCGCCACAAGAGGAGTTGATGAAGAGGCCATATTGAACTCACTGCCTCTGGATCTTCGTCGTGAAATTCGACGGCACTTGTGTCTTTCCCTCGTTCGCCGAGTTCCATTCTTCTCACAGATGGATGGTCAGCTCCTTGATGCGATTTGCCAACGCCTCGTCTCATCATTGAGCACTGAAGGAACCTACGTAGTCAGGGAGGGAGATCCGGTTACTGAAATGGTGTTCATTATCAGAGGACAACTGGAGAGCTCCACAACCAACGGAGGAAGGTCCGGTTTCTTCAATTCTATAACACTCAGACCTGGTGACTTTTGCGGCGAGGAATTATTGACTTGGGCTTTAATGCCAAGCTCAAGTTTACACCTGCCTTCTTCTACACGAACTGTTAGGGCCCTCACTGAAGTTGAAGCTTTTGCGTTACATTCGGAAGATCTAAAATTTGTAGCTAGTCAGTTCAAGCGCCTTCACAGCAAGAAACTGCAGCATGCATTTAGGTATTATTCCCATCAATGGAGGACATGGGCTGCTTGCTTGATACAAGTAGGTTGGAGAAGGCTCCTGAGAAGAAGAGCACTGAAAGAGTTGATGCAGAAAGAGAGTTCGTACTACATGGATATTCCTGGTGACAATCTTCCACGTGATGAATATGGTGGCAACACAAAGCGCGGCCAGAATCTTTCACCATCAGTGTTGGCCTCCAGGTTTGTCGCAAACACAAGGAAAGGGACGAATCGAAAAATAAAGGCGAGTGAGCCAGTTCCTCAACTGTTCAAGCCAGTGGAGCCTGACTTCTATGCAAATGAAGAGGACCATTTGTTAGGATGA 2109 0.4462 MNRLISTPVSKFRYFRQREEDDKQHLCAILWRCRVLNPGSDIVNYWHRVFLFTSMIALFVDPLYFYLPHMGDEGCMGIDGRLKHWVTFFRTLTDVFQWLHIAMKFRIAFVAPSSRVFGRGELVRDPKEIARRYLRTDFIVDLAASLPLPQACHAFCFILLNFQKCSFVHEYIVIWIIIPSTTDHKSEHANNALALLVLVQYIPRLFVIYPLNQQIVKTTGIVAKTPWTGAAFNLASYLIASHVIGASWYLSSIARQLACWNLECNKEKHSTVPCLHVYLNCDHTHTLERKNWLNVTSTISNCNAKNKDIDFKFGMFAAAFENDVASTTFMKKYSYCLWWGLRSLSSYGQELDTTTYIGENLFCVFLAITGLGLFALLIGNMQNYLQSMSQRVEEFRIKKKDTEEWMRHRQLPPDLQERVRKFVAYQWLATRGVDEEAILNSLPLDLRREIRRHLCLSLVRRVPFFSQMDGQLLDAICQRLVSSLSTEGTYVVREGDPVTEMVFIIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALMPSSSLHLPSSTRTVRALTEVEAFALHSEDLKFVASQFKRLHSKKLQHAFRYYSHQWRTWAACLIQVGWRRLLRRRALKELMQKESSYYMDIPGDNLPRDEYGGNTKRGQNLSPSVLASRFVANTRKGTNRKIKASEPVPQLFKPVEPDFYANEEDHLLG* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01322 702 CDD CAP_ED 464 595 IPR000595 -
Pte15g01322 702 Gene3D - 45 387 - -
Pte15g01322 702 FunFam Cyclic nucleotide-gated ion channel 1 391 455 - -
Pte15g01322 702 Pfam Ion transport protein 45 392 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pte15g01322 702 Pfam Cyclic nucleotide-binding domain 487 575 IPR000595 -
Pte15g01322 702 Gene3D Jelly Rolls 462 582 IPR014710 -
Pte15g01322 702 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 27 691 - -
Pte15g01322 702 SUPERFAMILY Voltage-gated potassium channels 39 391 - -
Pte15g01322 702 SMART cnmp_10 464 595 IPR000595 -
Pte15g01322 702 Gene3D Helix hairpin bin 388 455 - -
Pte15g01322 702 FunFam Cyclic nucleotide-gated ion channel 1 462 580 - -
Pte15g01322 702 ProSiteProfiles cAMP/cGMP binding motif profile. 464 594 IPR000595 -
Pte15g01322 702 SUPERFAMILY cAMP-binding domain-like 391 589 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01322 Pte-Chr15 10232652 10237089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01322 17 698 Ion Channels AT5G14870 61.702 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01322 K05391 - qsa:O6P43_004600 939.873