Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01314 ATGTCACAAGGGTATGCGATTGAGCTCTACTTTGACCCTGCGCTCGAAAACCAGGTTTTAAAGGCTTGGAATGTATTGGCTAGACGACAGATCAGTACTCAGCTTATAGAAATTGAGTCACGCCCGCACATTACTCTCTTTTCTAGCTCCTCTATTGATCCTGTCAAGCTTGAGTCCACTGTGAAGACTTTTGCTTCAAAGCAAGAACCATTAACTTTGTCATTCTCTTCAATTGGCAGTCTAACGAACGACAATAACGTGCTGTTTCTGGCACCAACTCCTTCCATTTCAATATTGCAGTTTCAATCTCAATTGTGCGATGCAGTCAGGAAAGAAGGAATTGAGATAGGAGATGAATATCGTCAAGATTCATGGGTTCCTTATTGCGCAGTTGCTGAGGAGGTGCCAAGGACTCGGATGGCGGAGGCGTTCTGTGTTTTGCGAGACTTGAAGTTACCAGTCACAGGATATGCATTGGATATTGGGTTGGTAGAACTGTCACCGGTTCGCGAGCTCTTCTCCTTTGTGCTTGGGAATACAACCGAATCGTGA 552 0.4493 MSQGYAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSSSIDPVKLESTVKTFASKQEPLTLSFSSIGSLTNDNNVLFLAPTPSISILQFQSQLCDAVRKEGIEIGDEYRQDSWVPYCAVAEEVPRTRMAEAFCVLRDLKLPVTGYALDIGLVELSPVRELFSFVLGNTTES* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01314 183 Pfam 2'-5' RNA ligase superfamily 41 155 - -
Pte15g01314 183 SUPERFAMILY LigT-like 4 133 IPR009097 -
Pte15g01314 183 Gene3D Cyclic phosphodiesterase 5 178 - -
Pte15g01314 183 PANTHER - 1 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01314 Pte-Chr15 10197074 10200421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01314 1 184 Calmodulin-binding Proteins AT5G40190 72.826 3.11e-95 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01314 - - cave:132181051 325.865