Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01310 ATGGGTGGCGGAACAGAAGCTTTCCCAGAATTAGGTCGACACTGCCAACATGTCGATTGCAACCAACTAGATTTCCTTCCATTTACCTGCAACGCTTGTCAAAAGATGTTCTGTCTGGAACATAGATCATTCAAGTCACATGATTGTCCCAAAACGGACCGTGACAGCAGAAGGGTCCTGGTTTGTGAGACGTGTTCAACTTCGATTGAAATGACTGGAAGGAGCCATGAGGAAGAAAAGGTTATACTGGAGAAGCATGAGAAGTCTGCAGATTGTGACCCCAAAAAGAAAAAGAAACCCAGATGCCCAGTCAAAAGGTGCAAGGAAGTTTTGACTTTTTCCAACAATAGTACATGCAAAATTTGTCAATTGAAGATTTGTCTCAAGCACCGATTCCCAGCTGATCATGCTTGTGAAAACGTAGCTATGGTGGGTTCATCCAAAGTGCCAGTGGCATTGGGTGCTGCTGATAGAAGCTTCAACGAGAGATTCTTGGTTGCTTTAGCTTCAAGGAGCGGGAAGGAATGTGCCAAGACGGGAAATCAACCCAAGTCTCCCAAAGAAATACTTGCGTCCGTCAAAGCTCATTGA 591 0.4484 MGGGTEAFPELGRHCQHVDCNQLDFLPFTCNACQKMFCLEHRSFKSHDCPKTDRDSRRVLVCETCSTSIEMTGRSHEEEKVILEKHEKSADCDPKKKKKPRCPVKRCKEVLTFSNNSTCKICQLKICLKHRFPADHACENVAMVGSSKVPVALGAADRSFNERFLVALASRSGKECAKTGNQPKSPKEILASVKAH* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01310 196 MobiDBLite consensus disorder prediction 176 196 - -
Pte15g01310 196 ProSiteProfiles Zinc finger AN1-type profile. 96 146 IPR000058 GO:0008270
Pte15g01310 196 SMART AN1_Zf_4 102 143 IPR000058 GO:0008270
Pte15g01310 196 SMART AN1_Zf_4 15 54 IPR000058 GO:0008270
Pte15g01310 196 Gene3D - 2 68 IPR035896 -
Pte15g01310 196 Gene3D - 74 150 IPR035896 -
Pte15g01310 196 ProSiteProfiles Zinc finger AN1-type profile. 9 57 IPR000058 GO:0008270
Pte15g01310 196 Pfam AN1-like Zinc finger 102 140 IPR000058 GO:0008270
Pte15g01310 196 Pfam AN1-like Zinc finger 15 52 IPR000058 GO:0008270
Pte15g01310 196 SUPERFAMILY AN1-like Zinc finger 5 58 IPR035896 -
Pte15g01310 196 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 7 176 - -
Pte15g01310 196 SUPERFAMILY AN1-like Zinc finger 62 144 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01310 Pte-Chr15 10165018 10165744 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01310 2 176 C2H2 Transcription Factor Family AT3G28210 60.571 5.63e-73 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01310 - - qsa:O6P43_034562 282.337