Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01309 ATGGCTGGAAAAGCACTCACAAGAATGGTAATTCAGATGGCTCTTCTAGCCATCATTTTCCATGTCGGCCAATCAAGTCGCCTCCTATTAGGGGCGAATGAGCTTATACCAAGTGATGCATCTCAACTTCAAGCATGGTTTGACAGTCAAGTTCAAGATGCCAATAGACCTGACCTTGACCCTGAACTAAAGAAGGCTGAGTCTAGCCCTCCAAAAATCATCAAGGTTAGGAAGGATGGCAGCGGAGATTTTAAGACTGTTACGGAGGCAGTGAACAGCATCCCAGTTGAAAATGCCAACCGTGTAATCGTTCATATCGGAGGAGGAGTCTATACTGAAAAAATTAAGATCGAAAGGAACAAACCTTTTATCACATTTTTTGGATCACCAAATGACATACCAACCTTGATGTTTGGTGGTACAGCAGCACAATATGGCACAGTCGATAGTGCTACCTTGATTGTGGAATCAGATTACTTTGTGGCAGTCAACATCAATATGACGAATTCTGCTCCAAAGCCAGACGGAAAGAGAGCCGGAGCTCAAGCTCTTGCATTTAGGATAGGTGGAAACAAAGCCTCACTTTACAATTGCCATTTCATTGGTTATCAAGACACAGTATGTGATGACAAAGGCAGACATTTGTTTAAAGATTGCTTCATTGAAGGCACTGTGGATTTCATATTTGGAAGTGGAAAGGCCTTGTATTTGAATACTATTTTACACGTAATTGGAGAGGATCCGTTCACAGTCGTAACTGCACATGCTAGAAGAAGCAATTCAGAAGATACTGGATTATCTTTTGTACATTGTAAGGTAACCGGTAAAGGTAATGGTACTTTCTTAGGCAGAGCTTGGACTACAAATCCAGCAACGGTTTTTGCCTATTCGGAATTGAGTCCAGTTGTCCATCCTCAAGGATGGACCAATAATTTTCATCCCGAAAGAGATAACTCGGTTTCTTTTGGAGAATACAAAAACATTGGTCCAGGTGCCGATTTTAGCAAACGTGCTAAGTTTGTCAAACAACTCAGTGATGCAGATGCTCAACCTTTTCTTAGTCTCAATTTTATCGAGGGTTCTAAGTGGATACTTCCTCCTCCAAATCCTGCAGTTTAA 1119 0.4155 MAGKALTRMVIQMALLAIIFHVGQSSRLLLGANELIPSDASQLQAWFDSQVQDANRPDLDPELKKAESSPPKIIKVRKDGSGDFKTVTEAVNSIPVENANRVIVHIGGGVYTEKIKIERNKPFITFFGSPNDIPTLMFGGTAAQYGTVDSATLIVESDYFVAVNINMTNSAPKPDGKRAGAQALAFRIGGNKASLYNCHFIGYQDTVCDDKGRHLFKDCFIEGTVDFIFGSGKALYLNTILHVIGEDPFTVVTAHARRSNSEDTGLSFVHCKVTGKGNGTFLGRAWTTNPATVFAYSELSPVVHPQGWTNNFHPERDNSVSFGEYKNIGPGADFSKRAKFVKQLSDADAQPFLSLNFIEGSKWILPPPNPAV* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01309 372 ProSitePatterns Pectinesterase signature 2. 221 230 IPR033131 -
Pte15g01309 372 Gene3D - 70 367 IPR012334 -
Pte15g01309 372 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 62 364 - -
Pte15g01309 372 SUPERFAMILY Pectin lyase-like 70 366 IPR011050 -
Pte15g01309 372 Pfam Pectinesterase 75 360 IPR000070 GO:0030599|GO:0042545
Pte15g01309 372 FunFam Pectinesterase 69 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01309 Pte-Chr15 10162936 10164406 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01309 36 368 Carbohydrate Esterase AT5G07410 54.491 2.28e-133 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01309 K01051 - qsa:O6P43_017163 476.478