Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01308 ATGATCTCTAGTCGCTGTGCTGCCTGCAAGAGTCAAAGGAGGAGATGCCCTTCTGACTGTATTTTCTCTCCTTATTTCCCTTCCAACGATCCCCATAGATTCAACTGTGTTCATAAAATATATGGTGCCAGCAATGTGGGAAGAATGCTTCAGGAAATCCCATACCATCTCAGATCACAAACTGCAGATTCATTGCATTATGAAGCACAATGTCGTTTACAAGATCCTGTATATGGCTGTGTTGGGATCATTACTCACTTGCACCAACAAATTGTTGATGTTGAAACTCAGTTAGCCAAAAACCAAGCTCAGATAGCACTTCATAATAATGGGAATGCACCTTCAAATTCAGATGTGCAACATGAATCAAATTCTAATGCACTCAGCTTTAGCCTTCAGCCTTCAGCCTTCATCAACCCGTTCACTTTTTCAAATCTGCTTCTTCCTAATTTGGGAACCTGTAGTTCTCACGCTGATCCTCTTTCCTCATTCATGGCTTCTTTGTTCGCTAACGGTATCTCGAGCTTTTCTCCACAACCCGCCTTCGAATCGCCGAAACTGCAAAGGGATTTTCCGCAAAAGCTCGATTTTTCAATTCATAAACGCAAAACCACACCAAAAAGTTCCGGACTTTTTCAGAATCCGAAATTCCTGAGTAACAGGGACTACGATGATAAGTTTAGATTTACGGTTGATTCCGATTCGTATTTTATCCCAAAAGGGCTTTCGAAAGAAACTGTGCGTTTGATTTCTTCGTTGAAACACGAACCCAATTGGATGTTAGATTTTAGGCTGAAAGCTTTTGAGAGATTCATGAAGATGAAAGAGCCAAAGTGGTCTGATAACCAATATCCACCTATTGATTTCCAAAATATCTGTTATTACTCTGCTCCTGAGAAAAAACCTGCTTTGAAAAGCTTAGATGAAGCCGACCCTGAGCTTCTTAGGTACTTCGATAGACTGGGCGTACCGTTGAATAAGCAGAACCGATTGGCTAATGTTGCAGTTGATGCTGTTTTGGATACCGTTTTTAGTGATGGTTCTTTTTGTTACATACCAAAGAACACCAGGTGCCCTATGCCAATTTCAACTTATTTTCGAATTAATGCATTAGAAACTGGACAGTTTGAGAGGACTTCGATTGTCGCGGATGAAGGAAGTTTCGTGGAGTACTTGGAAGGCTATACTGCACCATCTTATGATAAGAATCAGCTTCATGTTGCTGTTGTGGAGTTGCATTGTGCGGAAGGTGCAGAGATAAAGTACTCCGCAGTACAGAATTGGTATGCTGGGGATGAAGAAGGCAGAGGGAATAATGAACGAGGCGGCTATTCCTGCAGCGAGGGAGCCTTGGAGGCAATAGAAGGTGTTTCCGACTTAGAAGTTAAAATTGACGAGGGCATTTCAAGCGTTGAGGCGAAGATTCAAGCTACAGGGGTTGTTTCAAGTCTTGTGGAAACTATCCAAGGTTCAGGGTTCAAGTTACACACATTATATTTGAGTTTTGATGAAGATGGAGCCATTGGTCCTACATACAGCTTGGATTCTTATGCATGA 1557 0.4188 MISSRCAACKSQRRRCPSDCIFSPYFPSNDPHRFNCVHKIYGASNVGRMLQEIPYHLRSQTADSLHYEAQCRLQDPVYGCVGIITHLHQQIVDVETQLAKNQAQIALHNNGNAPSNSDVQHESNSNALSFSLQPSAFINPFTFSNLLLPNLGTCSSHADPLSSFMASLFANGISSFSPQPAFESPKLQRDFPQKLDFSIHKRKTTPKSSGLFQNPKFLSNRDYDDKFRFTVDSDSYFIPKGLSKETVRLISSLKHEPNWMLDFRLKAFERFMKMKEPKWSDNQYPPIDFQNICYYSAPEKKPALKSLDEADPELLRYFDRLGVPLNKQNRLANVAVDAVLDTVFSDGSFCYIPKNTRCPMPISTYFRINALETGQFERTSIVADEGSFVEYLEGYTAPSYDKNQLHVAVVELHCAEGAEIKYSAVQNWYAGDEEGRGNNERGGYSCSEGALEAIEGVSDLEVKIDEGISSVEAKIQATGVVSSLVETIQGSGFKLHTLYLSFDEDGAIGPTYSLDSYA* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01308 518 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Pte15g01308 518 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Pte15g01308 518 SUPERFAMILY Stabilizer of iron transporter SufD 245 431 IPR037284 -
Pte15g01308 518 PANTHER FES CLUSTER ASSEMBLY PROTEIN SUF 341 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01308 Pte-Chr15 10139497 10160315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01308 1 107 AS2 family AT3G26620 59.813 3.92e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte15g01308 SUFBD 3.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01308 - - tcc:18597136 390.963