Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01303 ATGGACACTATCTTGCTTGATGACGCAGCAAAGGCTTTGCCGGGTTATGTCAACAATGCAAATGCACTTAGAACAAAAGTCAGACGTCTCTATGATATAGCAAATGTCCTTTCTTCTATCAATCTGATTCAGAAGACTCATCCAAGAGAAAACAAGAAACCGGCATATAGATGGTTGGGATGGAGAGAAGCAAAAATAAATGAAGAAGCTGATGGTAGTTGTGATAAGAAGCAATCCGACAAGAGAGTGTTTGGGGGTGATATCACCAATTGCGATCCCAAGAGAAATAAGGTTGATTGTTCAATCCATGGAAGGCCTGAGCAGAAGTCACAAATGCCTGTTTTTATTGATAAAGATGGTATGAAGCCGGAAAATGATGGTAAAAGTACAACATTGCTGGAGCTATATCCTAAGAATAATTCAAAGGGAATAGTATTTGGTCCTTTTGCACCTGCCATGCCGAAAAGTGAGGATCAAGTATGTCCAAGTAAAGCACCTATTCGCGGCTGTGAGAGTTTGAGTTCCACATATCGTCCTCAGTATCATAACCAAGCTCTGAGTGACCTTTTCGCTCATTATATGGAAGCATGGAAGTCCTGGTGTTTAAAATTAGCAGCTCAACAACAAACGCAGCAGATATTCTGA 645 0.4078 MDTILLDDAAKALPGYVNNANALRTKVRRLYDIANVLSSINLIQKTHPRENKKPAYRWLGWREAKINEEADGSCDKKQSDKRVFGGDITNCDPKRNKVDCSIHGRPEQKSQMPVFIDKDGMKPENDGKSTTLLELYPKNNSKGIVFGPFAPAMPKSEDQVCPSKAPIRGCESLSSTYRPQYHNQALSDLFAHYMEAWKSWCLKLAAQQQTQQIF* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01303 214 Gene3D - 1 61 IPR036388 -
Pte15g01303 214 SMART E2F_TDP_2 1 60 IPR003316 GO:0005667|GO:0006355
Pte15g01303 214 Pfam E2F/DP family winged-helix DNA-binding domain 3 60 IPR003316 GO:0005667|GO:0006355
Pte15g01303 214 SUPERFAMILY "Winged helix" DNA-binding domain 9 61 IPR036390 -
Pte15g01303 214 PANTHER TRANSCRIPTION FACTOR E2F 3 182 IPR015633 GO:0000978|GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01303 Pte-Chr15 10124338 10125708 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01303 4 200 E2F-DP Transcription Factor Family AT3G48160 43.564 2.49e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Pte15g01303 E2F_TDP 1.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01303 - K09391 zju:107415406 196.052