Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01299 ATGATCTCTAGTCGCTGTGCTGCCTGCAAGAGTCAAAGGAGGAGATGCCCTTCTGACTGTATTTTCTCTCCTTATTTCCCTTCCAACGATCCCCATAGATTCAACTGTGTTCATAAAATATATGGTGCCAGCAATGTGGGAAGAATGCTTCAGGAAATCCCATACCATCTCAGATCACAAACTGCAGATTCATTGCATTATGAAGCACAATGTCGTTTACAAGATCCTGTATATGGCTGTGTTGGGATCATTACTCACTTGCACCAACAAATTGTTGATGTTGAAACTCAGTTAGCCAAAAACCAAGCTCAGATAGCACTTCATAATAATGGGAATGCACCTTCAAATTCAGATGTGCAACATGAATCAAATTCTAAGTATTGCTTTCAAGAGGGATCATCCAGTCTCTCCTTATGGCTCCACTAA 426 0.4085 MISSRCAACKSQRRRCPSDCIFSPYFPSNDPHRFNCVHKIYGASNVGRMLQEIPYHLRSQTADSLHYEAQCRLQDPVYGCVGIITHLHQQIVDVETQLAKNQAQIALHNNGNAPSNSDVQHESNSKYCFQEGSSSLSLWLH* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01299 141 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Pte15g01299 141 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 124 - -
Pte15g01299 141 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01299 Pte-Chr15 10085588 10086013 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01299 1 107 AS2 family AT3G26660 59.813 8.71e-47 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte15g01299 LOB 2.7e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01299 - - qsu:112008698 179.104