Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01298 ATGGCTGGAAAAGCACTCACAAGAATGGTAATTCAGATGGCTCTTCTAGCCATCATTTTCCATGTCGGCCAATCAAGTCGCCTCCTATTAGGGGCGAATGAGCTTATACCAAGTGATGCATCTCAACTTCAAGCATGGTTTCACAGTCAAGTTCAAGATGCCAAGAGGCCTGAACTTGACCCCGAACTGGTGAAGGCAGAGTCTAGCCCTCCGAAGATCATCAAGGTTAGGAAGGATGGCAGTGGAGATTTTAAAACTGTGACTGAAGCAGTCAACAGCATTCCAGTTGAGAATGCAAACCGCGTTATCGTCCATATTGGAGGAGGAGTGTATACTGAGAAAATCAAGATTGAAAGGAATAAACCTTTTATAACATTTTTGGGATCACCAAATGACATACCGACTTTGATGTTTGGTGGTACAGCAGCACAATATGGCACAGTCGATAGTGCTACCTTGATTGTGGAATCAGATTACTTTGTGGCAGTCAACATCAATATGACGAATTCTGCTCCAAAGCCAGATGGAAAAAGAGGTGGAGCACAAGCTCTTGCATTTAGGATAGGTGGAAACAAAGCTGCACTTTACAATTGCCATTTTATTGGTTACCAAGACACAGTGTGTGATGACAAGGGCAGACATTTATTTAAGGATTGCTTCATTGAAGGCACTGTGGATTTCATATTTGGAAGTGGAAAGGCCTTGTATTTGAATACTATTTTACACGTAATTGGAGAGGATCCGTTCACAGTCGTAACTGCACATGCTAGAAGAAGCAATTCAGAAGATACTGGATTATCTTTTGTACATTGTAAGGTAACCGGTAAAGGTAATGGTACTTTCTTAGGTAGAGCTTGGACCACAAATCCATCAACGGTCTTTGCCTATTCAGATTTGAGTCCCGTCGTCAATCCTCAAGGATGGACCAACAATTTTCATCCCGAACGAGACAACTCGGTTTCTTTTGGAGAATACAAAAACATTGGTCCAGGTGCCGATTTTAGCAAACGTGCTAAGTTTGTCAAACAACTCAGTGATGCAGATGCTCAACCTTTTCTTAGTCTCAATTTTATAGAGGGTTCTAAGTGGATACTTCCTCCTCCAAATCCTGCAGTTTAA 1119 0.4191 MAGKALTRMVIQMALLAIIFHVGQSSRLLLGANELIPSDASQLQAWFHSQVQDAKRPELDPELVKAESSPPKIIKVRKDGSGDFKTVTEAVNSIPVENANRVIVHIGGGVYTEKIKIERNKPFITFLGSPNDIPTLMFGGTAAQYGTVDSATLIVESDYFVAVNINMTNSAPKPDGKRGGAQALAFRIGGNKAALYNCHFIGYQDTVCDDKGRHLFKDCFIEGTVDFIFGSGKALYLNTILHVIGEDPFTVVTAHARRSNSEDTGLSFVHCKVTGKGNGTFLGRAWTTNPSTVFAYSDLSPVVNPQGWTNNFHPERDNSVSFGEYKNIGPGADFSKRAKFVKQLSDADAQPFLSLNFIEGSKWILPPPNPAV* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01298 372 ProSitePatterns Pectinesterase signature 2. 221 230 IPR033131 -
Pte15g01298 372 Gene3D - 72 367 IPR012334 -
Pte15g01298 372 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 65 364 - -
Pte15g01298 372 Pfam Pectinesterase 75 360 IPR000070 GO:0030599|GO:0042545
Pte15g01298 372 SUPERFAMILY Pectin lyase-like 70 366 IPR011050 -
Pte15g01298 372 FunFam Pectinesterase 69 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01298 Pte-Chr15 10081466 10082936 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01298 36 368 Carbohydrate Esterase AT1G69940 55.090 3.20e-135 389