Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01294 ATGGAGAGAAGTGATGTTGATAAGGTTGATGATGTGATGTTGCCTGGTTTCCGGTTTCATCCTACAGATGAGGAGCTTGTTGGGTTTTACCTCATCAGAAAAATTCAGCATCAGTCTCTTCCTATCGAGCTAATTAAGCCAGTAGACATTTACAAATACGATCCTTGGGATCTTCCAAAGTTGGCAAGTAGTGGTGAGAAAGAATGGTACTTTTACTGCCCAAGGGATCGAAAATACAGAAACAGCGCCCGCCCCAACAGAGTGACGGCAACTGGATTTTGGAAAGCAACTGGGACTGACAGGCCCATATACTCATCTGATGGAAAGTGCATTGGTTTGAAGAAGTCATTGGTGTTCTACAGAGGCAGAGCTGCCAAAGGTGTCAAAACTGACTGGATGATGCATGAGTTTCGGTTACCTTCTGTATCAGACTCCACACCTTCCAAGAAAATTTTGAACAAAAGCTTTTCTGCGCCTCAGGATGCATGGGCTATTTGTAGGATATTCAAAAAAACAAGCTCTATGGCACAGAGAGCTCTTTCTCATTCATGGATGACTGCTCTGCCAGAGGTCACTGTTTCTGATATGATGCCTCAGGGTGCAAACTGCCAACAGTTCAGTTCAGAGAATATTTCTTGTACAACTGAGATTGGATCTGTTCTACATTTCTGTGGTAACACTGATATACAGCAAACCTCAAGTACAAGTTTTTCTGATTCAGATGTTCCTCCTTACAAACCTATGATGAATCCTACAACCTCTAAGCCATCTCGCCTTCCTGTTTCAAATGGAAACGTCTGCAACAGCGTGGTATTCTCAGGACCAAACAAATCACCAGGTGATGGGAATTCGATGCTTTTCAACACTACCTTGATGGACTTTGATGAGTCAACTCAGCAGTTTGGCGGCTTTCCAGTCAGTCTACAGCAGGATATGCCAAGTAACGTAAACGCAGAAGAAGGTGAAGATGGTACAAGGAAGAGCACATGTCAAGAGCAAGTGAGTAACCAGTGGGGAACAGTACGACCGATTGGATTTCCTTTCAGTTTGTCTCCATCTGACGTTTGGAAACCTCCGACATGGTTTTCACCTACTTGTCCAGATGAGATGTCCTCTGGCTACTCCACCAACAAATCTCACACCTAA 1146 0.4398 MERSDVDKVDDVMLPGFRFHPTDEELVGFYLIRKIQHQSLPIELIKPVDIYKYDPWDLPKLASSGEKEWYFYCPRDRKYRNSARPNRVTATGFWKATGTDRPIYSSDGKCIGLKKSLVFYRGRAAKGVKTDWMMHEFRLPSVSDSTPSKKILNKSFSAPQDAWAICRIFKKTSSMAQRALSHSWMTALPEVTVSDMMPQGANCQQFSSENISCTTEIGSVLHFCGNTDIQQTSSTSFSDSDVPPYKPMMNPTTSKPSRLPVSNGNVCNSVVFSGPNKSPGDGNSMLFNTTLMDFDESTQQFGGFPVSLQQDMPSNVNAEEGEDGTRKSTCQEQVSNQWGTVRPIGFPFSLSPSDVWKPPTWFSPTCPDEMSSGYSTNKSHT* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01294 381 ProSiteProfiles NAC domain profile. 13 171 IPR003441 GO:0003677|GO:0006355
Pte15g01294 381 MobiDBLite consensus disorder prediction 307 329 - -
Pte15g01294 381 Gene3D NAC domain 22 176 IPR036093 GO:0003677|GO:0006355
Pte15g01294 381 FunFam NAC domain-containing protein 35 22 174 - -
Pte15g01294 381 SUPERFAMILY NAC domain 11 171 IPR036093 GO:0003677|GO:0006355
Pte15g01294 381 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 11 246 - -
Pte15g01294 381 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01294 Pte-Chr15 10024111 10025475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01294 8 211 NAC Transcription Factor Family AT1G26870 70.531 7.08e-99 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte15g01294 NAM 2.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01294 - - jre:109013175 503.827