Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01288 ATGGATTTTGGGTCCGATGCAAGAAAGATCAAAGAAGGTGGTGCAGAACGAGAAATTGGCTGTTGGCCTAAACTCAATTTTATATGTATCTGTATGCCTTCAAGATCAAAAGTGGATAGTACCATCAGTAGCACTCTTACTCAGCATGCACTGGAATGCAAATCCGTGCATGATAAAAAAGAAGACGAGAAAGTAGTTCCTTCGAGTTCCTCAAAACCTAGTGATGCCGAAAGTACGTCCTTCATTTCTGATTTCAGTGAGGAACTGAAGATTGCTTCTTGGTTGCGAAAATTCACATTTAATGAGCTAAAGCTGGCTACTAGAAATTTCAGGCCTGAAAGTCTCCTTGGTGAGGGAGGATTTGGTTGTGTGTTCAAAGGTTGGATAGAGGAAAATGGAACTGCACCTGTGAAACCTGGCACTGGGCTTACCGTGGCAGTCAAGACCCTCAATCATGATGGACTTCAAGGCCATAAAGAGTGGCTTGCTGAAATTAACTTTCTTGGCGATCTCATTCATCCAAATCTGGTTAAGTTAATTGGTTATTGCATTGAAGATGATCAGAGACTATTGGTTTATGAGTTTATGCCCCGAGGAAGTTTGGAGAACCACCTTTTCAGAAGACCCCTTCCTCTTCCTTGGTCCATCAGAATGAAAATTGCACTCGGTGCTGCAAAAGGTCTTGCATCTCTTCATGAAGAAGCTCGAAGGCCTATCATATATCGTGATTTCAAGACATCTAACATTCTGCTTGATGCGGAATACAATGCCAAACTCTCTGATTTTGGTCTTGCGAAAGATGGACCTGAAGGTGAAAAGACCCATATATCAACTCGAGTAATGGGAACTTATGGTTATGCAGCTCCTGAGTATGTAATGACCGGCCATTTGACATCGAAGAGTGATGTCTATAGTTTTGGAGTAGTCTTGCTGGAGATGCTTACTGGCCAAAGATCCATTGACAAAAATAGACCAAATGGGGAGCACAACCTCGTAGAGTGGGCAAGGCCACTACTAAGAGACAGGAGGCTGTTCTATCGGTTGATAGATCCTCGTCTTGAAGGTCACTTTTCAATTAAAGGGGCACAGAGAGCAACTCAGCTTGCTGCTCAGTGCCTTAGCCGTGATCCGAAATCTAGACCGATGATGAGTGAGGTTGTAGAAGCATTAAAGCCTCTGCCAAACCTTAAAGATATGGCTGTCTCATCCCTTTCGTTCCAGAAAATGCCAGTAGATCGTACAAAGTCCATGCCAAATGCTAAAAGTGGCATGCGGACACAGGTAGTTTATGTAACAAAGAGAGGTCAACCTGTACGACACTTTTCAAGTTCGAATGGTCCACATCCTTCCCCATATCATCATCTTTGCCAGTCACCAAAACCTAATGGTAGATGA 1395 0.433 MDFGSDARKIKEGGAEREIGCWPKLNFICICMPSRSKVDSTISSTLTQHALECKSVHDKKEDEKVVPSSSSKPSDAESTSFISDFSEELKIASWLRKFTFNELKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEINFLGDLIHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRPLPLPWSIRMKIALGAAKGLASLHEEARRPIIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGEKTHISTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGQRSIDKNRPNGEHNLVEWARPLLRDRRLFYRLIDPRLEGHFSIKGAQRATQLAAQCLSRDPKSRPMMSEVVEALKPLPNLKDMAVSSLSFQKMPVDRTKSMPNAKSGMRTQVVYVTKRGQPVRHFSSSNGPHPSPYHHLCQSPKPNGR* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01288 464 CDD STKc_IRAK 116 393 - -
Pte15g01288 464 FunFam Probable serine/threonine-protein kinase PBL8 196 409 - -
Pte15g01288 464 Pfam Protein kinase domain 113 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01288 464 SUPERFAMILY Protein kinase-like (PK-like) 89 390 IPR011009 -
Pte15g01288 464 MobiDBLite consensus disorder prediction 438 464 - -
Pte15g01288 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Pte15g01288 464 PANTHER OS01G0588500 PROTEIN-RELATED 71 393 - -
Pte15g01288 464 ProSitePatterns Protein kinases ATP-binding region signature. 116 148 IPR017441 GO:0005524
Pte15g01288 464 Gene3D Phosphorylase Kinase; domain 1 94 195 - -
Pte15g01288 464 ProSiteProfiles Protein kinase domain profile. 110 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01288 464 Gene3D Transferase(Phosphotransferase) domain 1 196 409 - -
Pte15g01288 464 FunFam Serine/threonine-protein kinase BIK1 77 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01288 Pte-Chr15 9976327 9982913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01288 96 410 Glycoside Hydrolase AT3G07070 54.717 2.45e-115 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte15g01288 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01288 - - cit:102617400 709.523