Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01285 ATGATGCAAAAAATGACAAAAGAAGAGTATTTAGCCTCTATGAGAAGGCATCACCATAATGGTAGATGGGAAGCAAGGATTGGAAGGGTTTTTGGCAACAAGTATCTCTACCTTGGCACTTACAGTACACAAGAGGACGCTGCTCGTGCTTATGACATTGCAGCCATCGAGTACAGAGGAGTCCTTACTGTGACAAACTTTGATATGAGTACTTACTTGAGATGTTTGAAGCCTGTTGGAGAAAAGCCTACAACAGATGCTTACAGAACCATCACAGAAGAGCTTCAGGAATTCCCAAGCCTGACAGAGCTTTCTCCAACTGAATCTCAGCCCTCTTTGTTCCAAGGTGATTCGTTTGACCCAGATTACTTGATTTTACCGCAGAAGCAAGATGTCTTCCGAAACACTGCCCCTCTCCGTTCATACAGAAAGTCATCTCCCACTGCGTTGGGGCTTTTACTTCGAACTTCAGTGTTTAGAGAACTGGTTGAGAAGAATCCGAATGGAGCCGAGGAGGACGCAGCTGAGGAGCGCACAGACAATCGAAGTACAAACAAAACCAATGGTGATGTATTTGAAGACATATTCTACGAGGGGATTGAGGATAACCTGTTTGTCTGCGATACAGATGGAATGGAATTGCAAGAAAGAGTTCATTTTCTGAGATGGATCATTTGTAACAAAAACCAAGCACGCACTTCTTATTATTTTGCAGATTTAATAGATGCCATCCTCATAGCGGAAGCCGCAACCTTAATTCATTCCTAG 768 0.4323 MMQKMTKEEYLASMRRHHHNGRWEARIGRVFGNKYLYLGTYSTQEDAARAYDIAAIEYRGVLTVTNFDMSTYLRCLKPVGEKPTTDAYRTITEELQEFPSLTELSPTESQPSLFQGDSFDPDYLILPQKQDVFRNTAPLRSYRKSSPTALGLLLRTSVFRELVEKNPNGAEEDAAEERTDNRSTNKTNGDVFEDIFYEGIEDNLFVCDTDGMELQERVHFLRWIICNKNQARTSYYFADLIDAILIAEAATLIHS* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01285 255 SUPERFAMILY DNA-binding domain 16 70 IPR016177 GO:0003677
Pte15g01285 255 Pfam AP2 domain 15 60 IPR001471 GO:0003700|GO:0006355
Pte15g01285 255 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 2 94 - -
Pte15g01285 255 CDD AP2 16 70 IPR001471 GO:0003700|GO:0006355
Pte15g01285 255 Gene3D AP2/ERF domain 13 70 IPR036955 GO:0003700|GO:0006355
Pte15g01285 255 SMART rav1_2 16 74 IPR001471 GO:0003700|GO:0006355
Pte15g01285 255 MobiDBLite consensus disorder prediction 165 184 - -
Pte15g01285 255 ProSiteProfiles AP2/ERF domain profile. 9 68 IPR001471 GO:0003700|GO:0006355
Pte15g01285 255 MobiDBLite consensus disorder prediction 165 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01285 Pte-Chr15 9959797 9961564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01285 2 83 AP2-EREBP Transcription Factor Family AT3G54320 63.636 1.29e-28 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte15g01285 AP2 1.7e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01285 - - tcc:18601455 223.402