Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01281 ATGGCCTTCCCACCACCTAGCTTCATGTTTCAAAGTCTACATGAAGATCAAGACCAACTTACCCCCACATCCCTCAACACCCTTCCGTCATGTCCAGCCTCACATTTTCATGGTGGCGCACCATTCATGATGAAGCGATCATTGTCATTTTCAGGCATCGACAACAAGTGTGATGAGGGGCATGATGATGACTTGTCAGACGATGGATCGCAGCTTGGGGAGAAGAAGAAGAGGCTGAATTTGGAACAGGTGAAAGCACTTGAGAAGAGCTTTGAGTTAGGGAACAAGCTTGAGCCAGAAAGGAAAATGCAACTGGCTAAGGCTCTTTGTCTGCAGCCTAGGCAGGTTGCCATATGGTTTCAGAACCGAAGGGCTAGATGGAAAACCAAGCAGTTGGAGAAAGACTATGAAGTACTCAAGAAGCAATTTGAAGCACTAAAATCAGACAACGATGCCCTTCACGCTCAGAACAAAAAACTTCATGAAGAGTTAGTGGCACTGAAAGGCAGAGGTAACAGCGAAGCAGCAACCATAGGTCACAAGAAAGAGAACGAGGGTTCTTGGAGTAATGGAAGTGACAGCAGCTCTGACATCAATCTAGAAATATCAAGGAATCCAGTTATAAACAGTTCCTTATCTTCTCAGAACGCAAAACATTTTCTATCCTCAGCCACAAGGCCACCAAGCATAACCCAATTCCTCCAAGGCCCATCAAGATCAGACCTTCATGGCCTGAAACTCGATCATATAGTTCAAGAGGAAAACTTTTGCAACATGTTTAGCAGCATTGATGAGCAGCAGCACAACTTTTGGCCTTGGCCAGCTGAGCAGCAACACTTCCATTGA 846 0.4551 MAFPPPSFMFQSLHEDQDQLTPTSLNTLPSCPASHFHGGAPFMMKRSLSFSGIDNKCDEGHDDDLSDDGSQLGEKKKRLNLEQVKALEKSFELGNKLEPERKMQLAKALCLQPRQVAIWFQNRRARWKTKQLEKDYEVLKKQFEALKSDNDALHAQNKKLHEELVALKGRGNSEAATIGHKKENEGSWSNGSDSSSDINLEISRNPVINSSLSSQNAKHFLSSATRPPSITQFLQGPSRSDLHGLKLDHIVQEENFCNMFSSIDEQQHNFWPWPAEQQHFH* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01281 281 Coils Coil 122 170 - -
Pte15g01281 281 ProSitePatterns 'Homeobox' domain signature. 105 128 IPR017970 GO:0000981|GO:0006355
Pte15g01281 281 SMART HOX_1 73 134 IPR001356 GO:0003677
Pte15g01281 281 Pfam Homeobox associated leucine zipper 130 169 IPR003106 GO:0006355|GO:0043565
Pte15g01281 281 Gene3D - 59 148 - -
Pte15g01281 281 ProSiteProfiles 'Homeobox' domain profile. 70 130 IPR001356 GO:0003677
Pte15g01281 281 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 44 273 IPR045224 GO:0003700
Pte15g01281 281 MobiDBLite consensus disorder prediction 175 195 - -
Pte15g01281 281 CDD homeodomain 75 131 IPR001356 GO:0003677
Pte15g01281 281 FunFam Homeobox-leucine zipper protein ATHB-13 67 134 - -
Pte15g01281 281 Pfam Homeodomain 75 128 IPR001356 GO:0003677
Pte15g01281 281 SUPERFAMILY Homeodomain-like 67 132 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01281 Pte-Chr15 9874782 9876983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01281 1 273 Homeobox Transcription Factor Family AT3G01220 52.113 5.05e-84 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte15g01281 Homeodomain 7.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01281 K09338 - qsa:O6P43_009065 372.474