LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte15g01264	ATGGGGACTCTACCCGAACCAAATATGAATAGCTTGAACCACGACACAGATCATAATCAACTCTTCTCAGATGGATCAGCAAAGCCCCTGCTGCGACACTACCCCCCTGGTTTTCTTAGAAAGGTTTTGGCAGAAACTATTGCAACATACCTTTTGGTGTTCGTCACATGTGGATCTGCTGCACTGAGTGCAAGCGATGAACGAAAGGTCTCAAAGCTTGGAGCTTCGGTTGCAGGAGGGCTCATAGTCACTGTCATGATCTATGCTGTAGGACATGTCTCTGGTGCACACATGAATCCAGCTGTCACTTTAGCTTTTGCAGCAGTTAGACATTTTCCATGGAAGCAGGTTCCAATCTATGTAGCAGCGCAACTAACAGGATCCATTTCAGCTGCATTCACACTTCGCGAACTATTGAATCCAATAAAGCATGTGGGCACAACATCACCATCTGGAACTGATATTCAAGCTTTAGTTATGGAAATAGTAGTCACGTTCTCCATGATGTTCATCACCTCAGCAGTGGCAACAGACACAAAAGCTATAGGTGAGCTAGCTGGAATTGCAGTTGGTTCTGCAGTATGTATAACATCCATCCTAGCCGGGTAA	609	0.4532	MGTLPEPNMNSLNHDTDHNQLFSDGSAKPLLRHYPPGFLRKVLAETIATYLLVFVTCGSAALSASDERKVSKLGASVAGGLIVTVMIYAVGHVSGAHMNPAVTLAFAAVRHFPWKQVPIYVAAQLTGSISAAFTLRELLNPIKHVGTTSPSGTDIQALVMEIVVTFSMMFITSAVATDTKAIGELAGIAVGSAVCITSILAG*	203

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte15g01264	202	PANTHER	AQUAPORIN NIP2-1	23	202	IPR034294	-
	Pte15g01264	202	ProSitePatterns	MIP family signature.	97	105	IPR022357	-
	Pte15g01264	202	Gene3D	Glycerol uptake facilitator protein.	8	202	IPR023271	-
	Pte15g01264	202	Pfam	Major intrinsic protein	38	200	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Pte15g01264	202	PRINTS	Major intrinsic protein family signature	40	59	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Pte15g01264	202	PRINTS	Major intrinsic protein family signature	116	135	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Pte15g01264	202	PRINTS	Major intrinsic protein family signature	160	178	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Pte15g01264	202	PRINTS	Major intrinsic protein family signature	79	103	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Pte15g01264	202	SUPERFAMILY	Aquaporin-like	33	200	IPR023271	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte15g01264	Pte-Chr15	9684358	9686024	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte15g01264	6	203	Major Intrinsic Protein MIP	AT4G19030	42.925	6.01e-51	162

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte15g01264	K09874		-	vvi:100265406	310.071