Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01255 ATGGAGATTAATATTGTATCAAGAATCGGCAAAGAAGATGATCGTATTGAATTGCCACCAGGATTTCGATTTCATCCAACTGATGAAGAGCTCATAACTCATTATCTCTCACCAAAGGTTCTTGATAGCTCCTTCTCTGCCTGCGCGATGGGTGAGGTTGATTTGAACAAGTGTGAGCCATGGGATTTGCCTTGGAGAGCTAAAATGGGTGAAAAGGAATGGTACTTCTTCTGTGTTAGAGACAGAAAATACCCAACTGGTTTAAGAACAAACAGAGCTACAGAAGCTGGGTACTGGAAAGCTACAGGCAAAGACAAAGAGATCTACAGAGCAAAAACGCTGATTGGTATGAAGAAAACTCTGGTTTTCTATAAAGGAAGAGCTCCCAGAGGAGAAAAGACAAACTGGATTATGCATGAATATAGACTAGAATGGAATATTCCTGAGTACAACCCCATCAAAACAACTAAGAATGAATGGGTTATCTGCAGAATTTTTCAGAAGTGTTCGGGTGGAAAGAAAACGATTATTTCAGGTTTGGTGAGGTTAGGCTCCCATGGTAACCAACTTCGGTCATGCCTTCTGCCTCCATTGACGGATTCTCCACCACATGAAAGTGAAACAAAGACTACTGTTGGATCTCACGTGACCTGCTTCTCCGATCCACTGGAGGATCAAAAGACTAAAGATGACATGGTAGATAGCTTTGACAACAATGGCTACTTAGCTTCGTCATCTACGTCGAATGGCTCATTTACTTTTCCTAGGACAACTCCAACAGAACCATATCCATCGACACAAGTTGCAACCTCAGTTGGGATTTCAGAGTTGTCAGATTCCTTTCTGTTGCAAGATCAATCGATACTGAGGATGCTGCTAAATACAAAAGCAGAGTTGTCATGGCAAGGAGACTTGAGTTCTAATGACATGTCCTCAACAGTAGCCAACCAGGAAATGGTTCACAAATCTTTTGCTGATCAACTAGAATATCTGCCATCAACTTCTGCTGGACCTGTTGACTTTGGTTGCCTTTGGAACTACTAA 1044 0.4186 MEINIVSRIGKEDDRIELPPGFRFHPTDEELITHYLSPKVLDSSFSACAMGEVDLNKCEPWDLPWRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRAKTLIGMKKTLVFYKGRAPRGEKTNWIMHEYRLEWNIPEYNPIKTTKNEWVICRIFQKCSGGKKTIISGLVRLGSHGNQLRSCLLPPLTDSPPHESETKTTVGSHVTCFSDPLEDQKTKDDMVDSFDNNGYLASSSTSNGSFTFPRTTPTEPYPSTQVATSVGISELSDSFLLQDQSILRMLLNTKAELSWQGDLSSNDMSSTVANQEMVHKSFADQLEYLPSTSAGPVDFGCLWNY* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01255 347 ProSiteProfiles NAC domain profile. 18 168 IPR003441 GO:0003677|GO:0006355
Pte15g01255 347 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 257 - -
Pte15g01255 347 Pfam No apical meristem (NAM) protein 19 143 IPR003441 GO:0003677|GO:0006355
Pte15g01255 347 Gene3D NAC domain 27 171 IPR036093 GO:0003677|GO:0006355
Pte15g01255 347 MobiDBLite consensus disorder prediction 245 266 - -
Pte15g01255 347 SUPERFAMILY NAC domain 15 168 IPR036093 GO:0003677|GO:0006355
Pte15g01255 347 FunFam NAC domain-containing protein 100-like 27 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01255 Pte-Chr15 9646471 9648059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01255 16 348 NAC Transcription Factor Family AT5G07680 54.412 5.20e-117 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte15g01255 NAM 3.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01255 - - vvi:100250998 447.973