Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01254 ATGGGTCGATCACCATGCTGTGACAAGGTAGGTTTAAAGAAAGGACCATGGACGCCAGAGGAGGATCAGAAACTCTTAACATATATTGAAGAACATGGCCATGGAAGCTGGCGTGCCTTGCCTACAAAAGCAAGGTTACATTCATTCCAGCAGCATGACAAATCTGGACTAATAATTTCTTCATCTTCTGCTACAACATCCAATCAAGTTTTGAGTAAATCAGATGCAGCAGCAATACCATCTCAGTCTCTAGATATTCTCAATGCTTGGAATGGTGGGTGGCTAAAATCCACTCATCACGTCAACGGGAAATTTACTCTTGCAGACCTTGAATCTCCTACTTCTAACTTAGCTTTCTCTGAGAATAATGCACCAACACTGATGACTAGTATTGACCTCGGGGAGAGTTATGCTGCAGCTGGAACTGTTAAGAAAGAAGGTGAACAGGTGTGGAAGAGTTATGAGGATTCGACACACTTCACTCAATGTAAAGATTCTCTGGAACACTCGATGGCTTTTACGTCAGGTTTACATGAGTTAATGTCTTCGGAAGGTACATGTTCGTCTGAATCTCTCATAACTAGTACTGGTGGCCATGTTCATCTTGAAAATCTTATGACGGATGAATGTTTCACTGATTTTTTGCTCAATAATTCCGATGAAAAAGGTGTCTCATCAGATGGCGGGGGAGAGTCTGATCATGGCAGTGGCAGTACTGGTAGTGAATACTGTAAAACAATTAGAACTCAGAGCATTCTTAATTTAGTCAATTTCTCCATCACATTCTCCCAATGTTTCTGA 801 0.4145 MGRSPCCDKVGLKKGPWTPEEDQKLLTYIEEHGHGSWRALPTKARLHSFQQHDKSGLIISSSSATTSNQVLSKSDAAAIPSQSLDILNAWNGGWLKSTHHVNGKFTLADLESPTSNLAFSENNAPTLMTSIDLGESYAAAGTVKKEGEQVWKSYEDSTHFTQCKDSLEHSMAFTSGLHELMSSEGTCSSESLITSTGGHVHLENLMTDECFTDFLLNNSDEKGVSSDGGGESDHGSGSTGSEYCKTIRTQSILNLVNFSITFSQCF* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01254 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 38 IPR017930 -
Pte15g01254 266 Gene3D - 11 75 - -
Pte15g01254 266 ProSiteProfiles Myb-like domain profile. 9 45 IPR001005 -
Pte15g01254 266 SUPERFAMILY Homeodomain-like 11 43 IPR009057 -
Pte15g01254 266 CDD SANT 16 43 IPR001005 -
Pte15g01254 266 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 47 - -
Pte15g01254 266 Pfam Myb-like DNA-binding domain 14 40 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01254 Pte-Chr15 9637400 9639555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01254 1 47 MYB Transcription Factor Family AT5G15310 89.362 2.84e-25 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte15g01254 Myb_DNA-binding 1.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01254 K09422 - cave:132181307 137.887