Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01249 ATGGCAACTCGTGTTATCACCGTTTCACAAGATGGAACAGGAGACTTTAGGACGGTTCAAGAAGCCATTGATGCCATTCCATTATCCAATACATGCCGAACGGTTGTCCGGGTTGCTCCAGGCATCTACAAGCAACCAGTGTACATTCCCAAGACAAAAAATTTTATCACTCTGGCTGGCCTTAGCGCTGAAGACACTTTGCTGACATGGAATAACACTGCCACCAGTATTGAACACCATCGGGCTCCCCGAGTTATAGGGACCGGGACTTTTGGATGTGGGAGTACAATTGTGGAAGGGGAGGACTTCATTGCTGAGAATATTACGTTTGAGAATTCTTCTCCGAAGGGTTCTGGCCAAGCTGTAGCAATCAGAGTGACAGCAGATAGGTGTGCATTCTATAATTGCAGATTCCTTGGGTGGCAGGACACTTTGTACTTACATTATGGCAAACAGTACTTGAAAGATTGCTATATTGAAGGAAGTGTGGATTTCATTTTCGGAAATAGCACTGTTCTTTTGGAGCATTGCCATATACATTGCAAGTCTGAAGGCTTCATAACAGCTCAGAGCAGGAAATCTTCTCAGGAGACAACTGGTTATGTTTTTGTTAGATGTGTTATCACTGGTAATGGGAAGGCTTCATATACCTATCTTGGTCGACCTTGGGGACCTTTTGGAAGGGTGGTCTATGCATACACATACATGGATCAATGCGTAAGACATCTTGGGTGGGATAACTGGGGAAAGACGGAGAACGAGAGGAGTGCTTGCTTTTATGAGTACAGGTGTTATGGTCCTGGTAGTTGTCCATCCAAACGGGTAACATGGGCAAGAGAATTGGTGGATGAAGAAGCAGCAGAGTTCCTGATGCACAGTTTCATTGATCCAGACTTAAACAAACCTTGGCTTGCTATGCGAATGGGCGTGAGGATACCATATTCTGCTTAA 951 0.4479 MATRVITVSQDGTGDFRTVQEAIDAIPLSNTCRTVVRVAPGIYKQPVYIPKTKNFITLAGLSAEDTLLTWNNTATSIEHHRAPRVIGTGTFGCGSTIVEGEDFIAENITFENSSPKGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTVLLEHCHIHCKSEGFITAQSRKSSQETTGYVFVRCVITGNGKASYTYLGRPWGPFGRVVYAYTYMDQCVRHLGWDNWGKTENERSACFYEYRCYGPGSCPSKRVTWARELVDEEAAEFLMHSFIDPDLNKPWLAMRMGVRIPYSA* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01249 316 Pfam Pectinesterase 6 296 IPR000070 GO:0030599|GO:0042545
Pte15g01249 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Pte15g01249 316 SUPERFAMILY Pectin lyase-like 3 303 IPR011050 -
Pte15g01249 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 3 298 - -
Pte15g01249 316 FunFam Pectinesterase 2 309 - -
Pte15g01249 316 Gene3D - 1 309 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01249 Pte-Chr15 9615886 9620271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01249 4 307 Carbohydrate Esterase AT5G47500 39.873 6.59e-74 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01249 K01051 - qsa:O6P43_004451 602.823