Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01244 ATGGATGGACACACTGGGCGGAGTGGGACTGGCGTGGATATGTATCTGCCAAATTATAAATTGGGAAAAACACTTGGAATTGGGTCATTCGGCAAAGTGAAAATTGCCGAGCATGCACTAACTGGTCACAAGGTGGCAGTTAAGATCCTTAACCGTCGCAAGATAAAGAATATGGATATGGAAGAAAAAGTAAGAAGAGAAATCAAGATATTGAGGCTGTTCATGCATCCGCACATCATAAGACTTTATGAGGTCATAGAGACCCCTACTGACATATATCTTATCATGGAGTACGTGAAGTCTGGTGAGCTTTTTGATTATATTGTGGAGAAGGGAAGGTTGCAGGAAGATGAAGCTCGTCATTTCTTCCAGCAGATAATCTCTGGTGTGGAGTACTGTCATAGGAATATGGTTGTTCATAGAGACCTTAAACCTGAGAATTTACTTTTGGACTCTAAACGTAATGTGAAGATTGCTGACTTTGGTTTGAGCAATATCATGTGTGATGGACATTTCCTTAAGACGAGTTGCGGAAGCCCAAACTATGCTGCTCCTGAGGTAATCTCTGGGAAATTATACGCTGGTCCTGAAGTCGATGTCTGGAGCTGTGGTGTCATATTGTATGCTCTTCTCTGCGGTACCCTTCCCTTTGATGATGAGAATATTCCAAATCTTTTTAAGAAAATAAAGGGTGGGATTTACACTCTTCCCAGCCATCTATCTCCTGGTGCTAGAGATTTAATCCCAAGGATGCTTGTGGTAGATCCCATGAAGAGAATGACTATACCCGTGATACGCCAACACGCATGGTTCCAAGCTCGTCTGCCTCGCTATTTAGCTGTGGCCCCACCTGATACAATGCAGCAAGCAAAGAAGATTGATGAGGAAATTCTTCAGGAAGTGGTGAAGATGGGATTTGACAGAAACCAATTGGTCGAATCTCTTCGTAACAGGATACAAACTGAGGGTACTGTAGCATACTATTTGTTATTGGATAACCGATTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAATTTCAAGAAACTATGGAAACTGGGTTTAACCGAATGCATCCTGGTGAGCTTGGTGCTCCGGCTGTTGGGAACCGGCTTCCTGCCGGCTATATGGATTATCAAGGGATGGGATTGAGGCCACAGTTTCCAGTTGAAAGAAAATGGGCTCTTGGACTTCAGTCTGGAGCACATCCTCGGGAGATAATGACAGAGGTCCTGAAAGCTCTGCAAGCATTGAATGTCTGCTGGAAGAAGATTGGCCATTACAACATGAAATGCAGGTGGACTCCTGGTCATGATGATGTCATGATTAATACTAATGTTCATAGTAATCATTATTTTTGCGATGATTCTGCCATCATCGAGAACAACGCCATCACCAAGTCACCCAATGTGATCAAGTTTGAAGTGCAGTTATACAAAACCAGGGAGGAGAAGTATCTGCTTGATCTTCAGAGGCTCCAGGGTCCACAGTTCCTCTTCTTGGATCTTTGTGCTGCTTTCCTTGCGCAACTTCGAGTCCTTTGA 1542 0.4377 MDGHTGRSGTGVDMYLPNYKLGKTLGIGSFGKVKIAEHALTGHKVAVKILNRRKIKNMDMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYLIMEYVKSGELFDYIVEKGRLQEDEARHFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKRNVKIADFGLSNIMCDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRMTIPVIRQHAWFQARLPRYLAVAPPDTMQQAKKIDEEILQEVVKMGFDRNQLVESLRNRIQTEGTVAYYLLLDNRFRVSSGYLGAEFQETMETGFNRMHPGELGAPAVGNRLPAGYMDYQGMGLRPQFPVERKWALGLQSGAHPREIMTEVLKALQALNVCWKKIGHYNMKCRWTPGHDDVMINTNVHSNHYFCDDSAIIENNAITKSPNVIKFEVQLYKTREEKYLLDLQRLQGPQFLFLDLCAAFLAQLRVL* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01244 513 FunFam Non-specific serine/threonine protein kinase 10 349 - -
Pte15g01244 513 PANTHER SERINE/THREONINE KINASE 18 336 - -
Pte15g01244 513 FunFam Non-specific serine/threonine protein kinase 8 98 - -
Pte15g01244 513 SMART serkin_6 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01244 513 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 464 512 IPR001772 -
Pte15g01244 513 Gene3D Kinase associated domain 1, KA1 396 511 - -
Pte15g01244 513 CDD STKc_AMPK_alpha 16 271 - -
Pte15g01244 513 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 292 332 IPR015940 -
Pte15g01244 513 SMART uba_6 294 331 IPR015940 -
Pte15g01244 513 Pfam Protein kinase domain 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01244 513 CDD UBA_SnRK1_plant 293 333 - -
Pte15g01244 513 Pfam Kinase associated domain 1 470 512 IPR001772 -
Pte15g01244 513 ProSiteProfiles Protein kinase domain profile. 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01244 513 SUPERFAMILY KA1-like 328 512 IPR028375 -
Pte15g01244 513 SUPERFAMILY Protein kinase-like (PK-like) 16 285 IPR011009 -
Pte15g01244 513 FunFam Non-specific serine/threonine protein kinase 396 511 - -
Pte15g01244 513 Pfam UBA/TS-N domain 293 329 IPR015940 -
Pte15g01244 513 Gene3D Transferase(Phosphotransferase) domain 1 11 349 - -
Pte15g01244 513 CDD AMPKA_C 390 510 - -
Pte15g01244 513 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Pte15g01244 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01244 Pte-Chr15 9592323 9597537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01244 19 271 CBL-interacting serine-threonine protein kinases AT4G24400 52.756 1.34e-91 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Pte15g01244 Pkinase 2.8e-79 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01244 K07198 - qsa:O6P43_009110 944.88