Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01243 ATGGGTTGCATTCATTCAAAGCGTGCGTCCAGGAAATCTTCACGTTCACGTTCATATTCACCTGCTCCTTATGTTTATTCTGTCGCTTCTGTTACAGACAGAGGCAATAATGGCAATTTGATTTTGGAGGCTGAGGGTCATTCTGGGATATTGGTTATTGAGAACAAACGGGATGGGAGATCAACATCATCATCAGAGGACAAGAATCGAGAGGCAGCGAGGAGAACAAAGAAAAGCACCTCCAGTACCAAAGCCTCTTTCGGTTTAAAACTCGGGTTTTCACATAGGCACGTCCAAGCAGAGCAGAACGCAGCTGGCTGGCCCTCATGGCTCACCTGTGTTGCCAGCGAAGCTATTCATGGTTGGGTACCCCTCCGAGCAGATGCCTATGAGAAATTGGAGAAGGTTGGGCAAGGTACATACAGTAGTGTCTTCCGAGCACGTGAAGTTGAGACAGGGAGAATGGTTGCCTTGAAGAAGGTTCGGTTTGATACTTTTCAACCGGAAAGCATTAGGTTCATGGCGAGAGAAATAACCATTCTCCGCAGACTTGATCATCCTAACGTTATGAAATTGGAGGGTCTAATTACATCTCGGTTGTCAAACAGCATATACTTCGTATTTGACTACATGGAACATGATCTTGCCGGCCTAGTATCCAATCCTGAGATCACTTTCACTGAATCCCAGGTAAAATGTTACATGAGGCAGTTACTGAGTGGAATTGAGCACTGCCACCTACGAGGTATAATGCACAGAGACATTAAGACCTCAAATATATTGGTAAACAATGATGGGGTTCTGAAAATAGGAGATTTCGGTTTGGCAAACACCCTGAGCACAAGTAACAAGCAACCACTGACCAGTCGTGTTGTGACTCTATGGTATCGTCCGCCTGAGTTATTGATGGGTTCAACCAGTTACAATGTATCGGTGGATCTCTGGAGTGTGGGTTGTGTGTTTGCTGAACTGTACCTGGGGAAGCCCATCCTTAAAGGGAGAACAGAGGTTGAACAGTTACACAAGATCTTTAAACTTTGTGGCACTCCACCGGATGACTTCTGGAAAAAACCAAAGCTCCCTCATGCTATGTTCAAACCACAAAGTCACTATGAAAGTTCTCTTAGGGAAAGGTGTAGAGATTTTCCAGAAACTGCCGTGAACCTGATTGAAGTTTTCTTGTCAATAGAACCATCACAGCGTGGCACTGCCTCTTCAGCATTGATGTCTGAGTATTTTAGTACCAAGCCACATGCATGCGATCCGTCAAGCCTACCGAAGTATCCTCCCAACAAAGAAATCGATGCTAAAATCCGTGAGGATATTCACAGGAAAAAGGCTGGTGTTAAAACAAGAGAGGCAGGACCAACTAGAAAGCCGGTTAGAGCACATAAAATTTCACAAGAGACAAACTGTAACCACAGAGCCGCTTCAAAAGAGGAAACTCAGAGTAGCGGCTATTCTAGTCGTAGAAACAGTGTCAAGAGCCATGGAGTTACCAAAGGAAGGAGTGGCACATCAATGCGTAAAGAGCTGTTGAAGCATCCTTTTGACGTAGTTTCAGATATTGCACAGATTAATGGCACTATTGGCTATGGAATGTATGATGGATCCAGTAGTGGCTTTTCATGGGTAAATAAAAGAGTTGCAGATGCAACATCAGTATTGTCAGATGGCTCAAAGAGCAAAGTCAGTGCATTGGATCCATCATTTGCAAAAGGCACGTACACGATTCAAAAAGACGTATACAAAGCTGATAAGAACACAAGTCGAGACAAGGAACCTCTGGAAATCCTCTACGATGATGAGGACTATTACAAGAGTCCAACAGAAATGATGGAAATATCAGGCTCAATGGTACATAAAAACGACTTAGAAGAAATGTTGCAAGCAAAAGGACTGCAAGCTCGTCGAAAATCAAGGTTTGAAAGAGAGATATGA 1941 0.4384 MGCIHSKRASRKSSRSRSYSPAPYVYSVASVTDRGNNGNLILEAEGHSGILVIENKRDGRSTSSSEDKNREAARRTKKSTSSTKASFGLKLGFSHRHVQAEQNAAGWPSWLTCVASEAIHGWVPLRADAYEKLEKVGQGTYSSVFRAREVETGRMVALKKVRFDTFQPESIRFMAREITILRRLDHPNVMKLEGLITSRLSNSIYFVFDYMEHDLAGLVSNPEITFTESQVKCYMRQLLSGIEHCHLRGIMHRDIKTSNILVNNDGVLKIGDFGLANTLSTSNKQPLTSRVVTLWYRPPELLMGSTSYNVSVDLWSVGCVFAELYLGKPILKGRTEVEQLHKIFKLCGTPPDDFWKKPKLPHAMFKPQSHYESSLRERCRDFPETAVNLIEVFLSIEPSQRGTASSALMSEYFSTKPHACDPSSLPKYPPNKEIDAKIREDIHRKKAGVKTREAGPTRKPVRAHKISQETNCNHRAASKEETQSSGYSSRRNSVKSHGVTKGRSGTSMRKELLKHPFDVVSDIAQINGTIGYGMYDGSSSGFSWVNKRVADATSVLSDGSKSKVSALDPSFAKGTYTIQKDVYKADKNTSRDKEPLEILYDDEDYYKSPTEMMEISGSMVHKNDLEEMLQAKGLQARRKSRFEREI* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01243 646 MobiDBLite consensus disorder prediction 470 503 - -
Pte15g01243 646 ProSitePatterns Protein kinases ATP-binding region signature. 136 159 IPR017441 GO:0005524
Pte15g01243 646 ProSiteProfiles Protein kinase domain profile. 130 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01243 646 CDD STKc_CDK9_like 130 413 - -
Pte15g01243 646 Gene3D Transferase(Phosphotransferase) domain 1 213 452 - -
Pte15g01243 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Pte15g01243 646 MobiDBLite consensus disorder prediction 446 469 - -
Pte15g01243 646 FunFam probable serine/threonine-protein kinase At1g54610 117 212 - -
Pte15g01243 646 PANTHER CELL DIVISION PROTEIN KINASE 128 417 - -
Pte15g01243 646 SMART serkin_6 130 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01243 646 FunFam probable serine/threonine-protein kinase At1g54610 213 453 - -
Pte15g01243 646 MobiDBLite consensus disorder prediction 53 83 - -
Pte15g01243 646 MobiDBLite consensus disorder prediction 53 78 - -
Pte15g01243 646 MobiDBLite consensus disorder prediction 446 509 - -
Pte15g01243 646 Gene3D Phosphorylase Kinase; domain 1 117 212 - -
Pte15g01243 646 Pfam Protein kinase domain 130 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01243 646 SUPERFAMILY Protein kinase-like (PK-like) 123 419 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01243 Pte-Chr15 9573309 9576985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01243 122 453 Core Cell Cycle Gene Families AT5G10270 45.272 7.09e-102 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pte15g01243 Pkinase 3.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01243 - - qsa:O6P43_004446 736.487