Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01242 ATGATGGCTGCTCAATCTGTGCCATCAGGTTTAGGTTCTAACCAGGAGCTGTCTATGCTGCCTGTATCAAGTGATTGTGAAGAAGCAAGTGGCGATGGTGCAAGAGAAAAAGAGGACTATCATGTTGAACCGCCTTCAAAGAGAAGAAATACTGAATCTGGAGATACTGATTTATCCCTGTCACACAAGAGCATAACTGAACCAAAAATTGTGATGCAAACTAGAAGTGAAGTAGATCTTTTAGATGACGGCTACAGATGGTGCAAGTATGGACAAAAAATGGTAAAAGGAAATCCTCATCCAAGGTGA 309 0.4142 MMAAQSVPSGLGSNQELSMLPVSSDCEEASGDGAREKEDYHVEPPSKRRNTESGDTDLSLSHKSITEPKIVMQTRSEVDLLDDGYRWCKYGQKMVKGNPHPR* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01242 102 MobiDBLite consensus disorder prediction 1 21 - -
Pte15g01242 102 Gene3D WRKY domain 68 102 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte15g01242 102 Pfam WRKY DNA -binding domain 82 102 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte15g01242 102 ProSiteProfiles WRKY domain profile. 76 102 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte15g01242 102 SUPERFAMILY WRKY DNA-binding domain 73 102 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte15g01242 102 MobiDBLite consensus disorder prediction 29 56 - -
Pte15g01242 102 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 24 102 IPR044810 GO:0003700
Pte15g01242 102 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01242 Pte-Chr15 9564226 9564610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01242 23 102 WRKY Transcription Factor Family AT2G03340 55.556 1.47e-23 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte15g01242 WRKY 2.3e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01242 - - zju:107415931 116.701