Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01231 ATGGAATCAGATCTTCAACAACATCATTTAATCCATGATCATCAGCTCCAGGGCAATCAGCCTCAAGTGAATTCTGGGTTGACGCGGTACCGTTCAGCTCCAAGTTCATACTTTACAAGTATCCTTGAAAGGAAGTTCTGCAATCAACTTTTCGATCGCCCTGCGAGCCCTGATACAGAGAGACTATTTACAAGGCTTATGAACAGCGCTGGTGGGGCTGCTGTAGTGGATTCGTTCACTCAGAGTGTTTCACCCGTAAGCCAAAATTCATCGTTGAAAGAAAAGATTGGCCCGCAGAGTCAGGTGGTGCCATCTATGAATAACGAGGCAATGGTTATCCAGCAGCAGCGGAGCAATATCAGTAGCTATTCCTCTGCCACACAAAACTTTCACCGGAGTTCATCTAAACCACCTTTGCCAAATCCTAGCTTAACTCCAGCAATGGAAGCTGCTTATCCAGCGGGACAAGTTCGGCTGCCGCATAGGAGGACTGGCGTTGTTAATCACTCCAATCTTATTCGGCACAACAGTTCACCAACCGGGTTGTTCTCCCAGATAAACATGGACGTCGACTATGCTGCTATAGGAGACAAGGGGAACTTTGGAGCTGCTAATAACAAGAATGAAGAAGACACTTTCTCTACTTCAAGCAGGTTGAAGAATACGATAAATTACTCGTCCGGGTTGACACCATCCCTTACTGGAATTGGCGTCAAAAGCATCGAAGTTAATAGTGTAGACAGTGAAGGTTTCTGGGATGATTCTGCAATCTTGTCCGACAACATGGGTGGACTCAAGCGATTTAGAGACGGCGAAGAACAAGGATTATCTGGTTTCAATTCGTCAGCTGGAAACCGACCTCCCCTTTTGGCTCATCACCTGAGTTTGCCTAAAACTCCAGCAGAATTGGCAGGCATTGAGAAATTTTTGGAGTTACCAGATTCTGTACCCTGCAGAATTCGTGCCAAGCGAGGTTTTGCCACTCATCCCAGAAGTATAGCAGAGAGGGTGAGAAGAACTAAAATCAGTGAGCGCATCAGGAAACTACAGGAGCTTGTTCCCAACATGGACAGGCAAACAAACACTGCAGACATGTTAGACCTGGCTGTAGATTACATCAAAGATCTTCAAAAACAGGTTCAGATGCTTACAGACACTCGCGCAAAATGTACATGTTTGCACGAGCAGCGGCGGCAGTAG 1200 0.4625 MESDLQQHHLIHDHQLQGNQPQVNSGLTRYRSAPSSYFTSILERKFCNQLFDRPASPDTERLFTRLMNSAGGAAVVDSFTQSVSPVSQNSSLKEKIGPQSQVVPSMNNEAMVIQQQRSNISSYSSATQNFHRSSSKPPLPNPSLTPAMEAAYPAGQVRLPHRRTGVVNHSNLIRHNSSPTGLFSQINMDVDYAAIGDKGNFGAANNKNEEDTFSTSSRLKNTINYSSGLTPSLTGIGVKSIEVNSVDSEGFWDDSAILSDNMGGLKRFRDGEEQGLSGFNSSAGNRPPLLAHHLSLPKTPAELAGIEKFLELPDSVPCRIRAKRGFATHPRSIAERVRRTKISERIRKLQELVPNMDRQTNTADMLDLAVDYIKDLQKQVQMLTDTRAKCTCLHEQRRQ* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01231 399 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 33 393 - -
Pte15g01231 399 SMART finulus 332 382 IPR011598 GO:0046983
Pte15g01231 399 FunFam Transcription factor bHLH130 family 327 396 - -
Pte15g01231 399 Pfam Helix-loop-helix DNA-binding domain 331 377 IPR011598 GO:0046983
Pte15g01231 399 MobiDBLite consensus disorder prediction 123 142 - -
Pte15g01231 399 CDD bHLH_AtbHLH_like 331 383 IPR045239 -
Pte15g01231 399 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 328 391 IPR036638 GO:0046983
Pte15g01231 399 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 326 376 IPR011598 GO:0046983
Pte15g01231 399 MobiDBLite consensus disorder prediction 1 25 - -
Pte15g01231 399 MobiDBLite consensus disorder prediction 123 138 - -
Pte15g01231 399 Gene3D - 328 398 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01231 Pte-Chr15 9502691 9505607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01231 1 392 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 42.067 1.74e-79 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte15g01231 HLH 2.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01231 - - qsa:O6P43_028130 455.292