Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01230 ATGACCACTGCAGTCTTACACAGTACTTACTTATTTATTTCCTTAGAATGGAACATAACCAGTGTCCCGGGAGACGGTGACGTTCCAAAAGTTGCTGATTTTCTTGGTGTGAGCAAGTCAGAGAATCAGTCAGATCTTGTGGCATTCAATGAAATTCAGCCCCATGATTCAGACTACTTGTTCTCCAATACCAGCGTGGTGCCTGTACAGAACTCTCCAGTCGCCACATCGGGTAGCTACGAGTTTCAAGAAAATGCTAGCAGCAATATGCAATCATTGACATTGTCTATGGGCAGTGGTAAAGGTTCTACTTCTGAAACCAGTGGTGATAATAGTACAAGTATTGTTGAAGCTGCACCGAGACGGACCTTGGACACCTTTGGCCAAAGAACATCAATATATCGTGGCGTAACAAGACATAGATGGACAGGTAGGTATGAGGCTCACCTTTGGGACAACAGTTGTAGAAGAGAAGGTCAATCAAGAAAAGGTCGCCAAGGTGGCTATGACAAGGAGGAGAAAGCAGCTAGGGCTTACGATCTTGCTGCCCTAAAATATTGGGGGCCATCTACAACTACCAACTTTGCTATAAGTAACTATGAGAGGGAACTAGAGGAAATGAAGCACATGACTAGACAAGAATTTGTGGCAGCCATCAGAAGGAAGAGCAGCGGTTTCTCTAGAGGTGCTTCAATGTATCGTGGAGTCACAAGGCATCATCAACATGGAAGATGGCAAGCTAGGATTGGCAGAGTCGCAGGAAACAAAGACCTTTATTTGGGAACTTTCAGTACTGAAGAGGAAGCTGCAGAAGCATACGACATAGCTGCAATTAAATTTAGAGGACTAAATGCAGTGACCAACTTCGACATGAATCGTTATGATGTGAAGAGTATCCTTGAAAGCAACACTCTTCCAATTGGTGGAGGGGCCGCTAAACGGCTGAAGGAGGCTCAAGCTCTCGAATCTTCGAGAAAACGTGAAGAGATGATTGCCCTCAGTTCAAGCTTCCAGTATGGAGGCTCCAGCACTAGTAGACTACACGGATATTCTCTAATGCAACATCAGTTTGAGCCGCCCCAGCCTCTTCTTAGCCTACACAGCCAAGAAATAACTCCATATTCCCATGACCCTTCATTTAACCATAACGATTACATTCAAACACAGCTCCAGCTGCACCAGCAGAGTACGGGCTCAAATTACCTAAACCAACCAACCCACAGCACACATCTATACAACAATTATCTTCAGACTCATCCAGCGTTGATTCAAGGACTAATGAACATGGGTTCTTCTTCTGTGATCGAGAATAATGGGAGCTCCAGTGGGAGTAATTATAATAGTGCGGCATTTTTGGGGAACGGTCTTGGTGTGGTGGCTTCAAATTCGTCAGCTTGTACTGGTAACGGTGAGGAACTTGCGATGGTTAAGGTTGATTATGACATGCCTTCCGGGGGTTATGGCGGCTGGTCGGGTGACTCGGTGCAAGGTTCAAATGCTGGTGGTGTCTACACAATGTGGAACGAGTAA 1530 0.4542 MTTAVLHSTYLFISLEWNITSVPGDGDVPKVADFLGVSKSENQSDLVAFNEIQPHDSDYLFSNTSVVPVQNSPVATSGSYEFQENASSNMQSLTLSMGSGKGSTSETSGDNSTSIVEAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGPSTTTNFAISNYERELEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMNRYDVKSILESNTLPIGGGAAKRLKEAQALESSRKREEMIALSSSFQYGGSSTSRLHGYSLMQHQFEPPQPLLSLHSQEITPYSHDPSFNHNDYIQTQLQLHQQSTGSNYLNQPTHSTHLYNNYLQTHPALIQGLMNMGSSSVIENNGSSSGSNYNSAAFLGNGLGVVASNSSACTGNGEELAMVKVDYDMPSGGYGGWSGDSVQGSNAGGVYTMWNE* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01230 509 FunFam AP2-like ethylene-responsive transcription factor 231 292 - -
Pte15g01230 509 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 90 384 - -
Pte15g01230 509 SUPERFAMILY DNA-binding domain 132 198 IPR016177 GO:0003677
Pte15g01230 509 SUPERFAMILY DNA-binding domain 231 291 IPR016177 GO:0003677
Pte15g01230 509 Pfam AP2 domain 133 188 IPR001471 GO:0003700|GO:0006355
Pte15g01230 509 Pfam AP2 domain 233 282 IPR001471 GO:0003700|GO:0006355
Pte15g01230 509 Gene3D AP2/ERF domain 232 292 IPR036955 GO:0003700|GO:0006355
Pte15g01230 509 Gene3D AP2/ERF domain 133 198 IPR036955 GO:0003700|GO:0006355
Pte15g01230 509 FunFam AP2-like ethylene-responsive transcription factor ANT 132 198 - -
Pte15g01230 509 CDD AP2 231 290 IPR001471 GO:0003700|GO:0006355
Pte15g01230 509 PRINTS Ethylene responsive element binding protein signature 134 145 IPR001471 GO:0003700|GO:0006355
Pte15g01230 509 PRINTS Ethylene responsive element binding protein signature 272 292 IPR001471 GO:0003700|GO:0006355
Pte15g01230 509 ProSiteProfiles AP2/ERF domain profile. 232 290 IPR001471 GO:0003700|GO:0006355
Pte15g01230 509 ProSiteProfiles AP2/ERF domain profile. 133 196 IPR001471 GO:0003700|GO:0006355
Pte15g01230 509 SMART rav1_2 133 202 IPR001471 GO:0003700|GO:0006355
Pte15g01230 509 SMART rav1_2 232 296 IPR001471 GO:0003700|GO:0006355
Pte15g01230 509 MobiDBLite consensus disorder prediction 94 114 - -
Pte15g01230 509 CDD AP2 132 198 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01230 Pte-Chr15 9475459 9478521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01230 12 510 AP2-EREBP Transcription Factor Family AT3G20840 64.568 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pte15g01230 AP2 9.7e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01230 K09285 - qsu:112019105 747.658