Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01229 ATGATCATGCTCTTGTATTTCTACATTTCTGATACCTTGCTTCAGGATAGTTTTAAAGAAATGGACCATGACAAGACTGGATGCCAAGCTCCCCCTGAGGGTCCTATCCTGTGCGTCAACAACTGTGGCTTTTTCGGGAGTCCAGCTACAATGAACATGTGTTCCAAATGCCACAAAGACTTGATGCTAAAACAAGATCAGGCGAAATTTGCTGCTTCTTCTATTGGGAGTATCGTGAATGGATCCACTAGTAATGTTGTTAATGAGCCCGTCGCTGCTGCTAATGTCGATGTTGCAGTCAGTTTAGTGAAATCTAAGATTACATCTCAGCCATTGTTGGCTTCAACTTCAGAGGAAAGTGCAGTGGAAAAGCCCAAGGAGGGTCCCAAACGCTGCACCAGTTGCAATAAGCGTGTTGGTTTAACTGGGTTCAACTGTCGGTGCGGTAATCTTTTCTGTGCTGTACACCGCTATTCGGAGAAGCATGACTGCCCATTTGATTACCGTACTTCTGGAAGGGATGCAATAGCCAAAGCAAACCCTGTCGTCAAGGCTGAGAAGCTTGATAAGATCTAG 576 0.4514 MIMLLYFYISDTLLQDSFKEMDHDKTGCQAPPEGPILCVNNCGFFGSPATMNMCSKCHKDLMLKQDQAKFAASSIGSIVNGSTSNVVNEPVAAANVDVAVSLVKSKITSQPLLASTSEESAVEKPKEGPKRCTSCNKRVGLTGFNCRCGNLFCAVHRYSEKHDCPFDYRTSGRDAIAKANPVVKAEKLDKI* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01229 191 SMART A20_3 35 59 IPR002653 GO:0003677|GO:0008270
Pte15g01229 191 Gene3D - 106 187 IPR035896 -
Pte15g01229 191 SMART AN1_Zf_4 132 169 IPR000058 GO:0008270
Pte15g01229 191 Pfam A20-like zinc finger 36 59 IPR002653 GO:0003677|GO:0008270
Pte15g01229 191 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 37 73 - -
Pte15g01229 191 PANTHER AN1-TYPE ZINC FINGER PROTEIN 33 191 - -
Pte15g01229 191 Pfam AN1-like Zinc finger 132 168 IPR000058 GO:0008270
Pte15g01229 191 Gene3D - 21 84 - -
Pte15g01229 191 FunFam Zinc finger AN1-type containing 6 105 187 - -
Pte15g01229 191 SUPERFAMILY AN1-like Zinc finger 113 186 IPR035896 -
Pte15g01229 191 ProSiteProfiles Zinc finger A20-type profile. 32 66 IPR002653 GO:0003677|GO:0008270
Pte15g01229 191 ProSiteProfiles Zinc finger AN1-type profile. 126 172 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01229 Pte-Chr15 9458190 9460755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01229 28 192 C2H2 Transcription Factor Family AT3G52800 45.238 2.73e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01229 - - qsa:O6P43_000126 291.967