Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01222 ATGAGGAAATCAGAACCAGCGACTGGGAAAAACAATAACCCCAACGTCAAACTTAGAAAGGGGTTGTGGTCTCCTGAGGAAGATGACAAACTCATAAAATACATGCTAAACAATGGCCAAGGTTGTTGGAGTGATGTGGCTAGAATTGCTGGTCTGCAGAGGTGTGGGAAAAGCTGTCGCCTTAGATGGATCAATTACTTGAGGCCTGATCTTAAGCGAGGAGCATTTTCAACACAAGAAGAGGAACTCATTATCCATTTACATTCCCTTCTTGGAAACAGATGGTCCCAGATAGCGGCGCGTTTGCCTGGGAGAACTGATAACGAAATAAAGAATTTCTGGAATTCAACCATTAAGAAAAGGCTCAAGAATTTGTCATCGCCAAACACTAGTGATTCGTCTCGATCAGATCCTAGAGATGTTAGTACGGGAGGCTCTATTTCCATGTCAGAACGTAGCAGAACACCTTTCTACATGAACTCATCTCCATCATCTTCAACCCAATTGCAAAACGCAGTTTTCAGCCACATGATGATGGATTCATTTCCTCTGGCAGATCAACAAGGTCTATACTCGTCGTCAAGTAATTCAGCTGGATATGTCTACAGCACAGCTCCATGCACACAAAATGGAGGTGGCTTCGCCGATAGTTTCTACAATGGGGTTTTTGGGTGCGTGGATATTAGGGCAGAACCAAACAACGTTTTTGCTCACCTCGAGAATGACAACACCAGAGACACCGTAAAATTGGAACACATGCCTGCCCGAATAACCAATCATAGTAACAGCTACTTCAGTAACATGAATATAAATAACATCATCAACACTTGCAATGACAACATTAATAAAGCTACTGAGAATATGCCTGGGGTTGGCAGTTGCTTTCAGGAAGAGTTAACAATGGGAGAATGGGACTTGGAAGAATTGATGAAAGATATCTCATCATTCCCCTTTGTTGACTTCCCAGTCCAGTAA 975 0.4277 MRKSEPATGKNNNPNVKLRKGLWSPEEDDKLIKYMLNNGQGCWSDVARIAGLQRCGKSCRLRWINYLRPDLKRGAFSTQEEELIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSPNTSDSSRSDPRDVSTGGSISMSERSRTPFYMNSSPSSSTQLQNAVFSHMMMDSFPLADQQGLYSSSSNSAGYVYSTAPCTQNGGGFADSFYNGVFGCVDIRAEPNNVFAHLENDNTRDTVKLEHMPARITNHSNSYFSNMNINNIINTCNDNINKATENMPGVGSCFQEELTMGEWDLEELMKDISSFPFVDFPVQ* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01222 324 Gene3D - 74 142 - -
Pte15g01222 324 PANTHER MYB DOMAIN PROTEIN 55 13 274 - -
Pte15g01222 324 MobiDBLite consensus disorder prediction 1 20 - -
Pte15g01222 324 Gene3D - 17 73 - -
Pte15g01222 324 FunFam MYB transcription factor 17 73 - -
Pte15g01222 324 CDD SANT 75 115 IPR001005 -
Pte15g01222 324 ProSiteProfiles Myb-like domain profile. 15 67 IPR001005 -
Pte15g01222 324 MobiDBLite consensus disorder prediction 124 164 - -
Pte15g01222 324 FunFam Transcription factor MYB46 74 141 - -
Pte15g01222 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 67 IPR017930 -
Pte15g01222 324 Pfam Myb-like DNA-binding domain 73 116 IPR001005 -
Pte15g01222 324 Pfam Myb-like DNA-binding domain 20 67 IPR001005 -
Pte15g01222 324 CDD SANT 23 67 IPR001005 -
Pte15g01222 324 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Pte15g01222 324 SMART sant 19 69 IPR001005 -
Pte15g01222 324 SMART sant 72 120 IPR001005 -
Pte15g01222 324 SUPERFAMILY Homeodomain-like 18 114 IPR009057 -
Pte15g01222 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 122 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01222 Pte-Chr15 9329890 9331984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01222 3 325 MYB Transcription Factor Family AT3G08500 43.605 1.91e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte15g01222 Myb_DNA-binding 1.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01222 K09422 - qsa:O6P43_000145 347.821