Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01220 ATGAAACAGAAAAAAGTATCTGCTTGGACGATGAAGATGTTGATAGATGCAGTGTCAAGTTCTGGGTTTTCGACAGTATCAAATGAATTAGCGGAAAGTTCTTATGATGATTTAGCAATATCGGTAGATAAGGAAATCACCAGTGAGATGGAAGTAATCGCTGCTGTCTATCACATTTTCATAAAATGTTGCTCAGTAGATAAGGAAATGCTTGTGGTGATACCAGAGAAAGACTTACTTCGTGACTGGGGGTTGGAGTACTGTGAGGCATTGCAGAAATCTGGGAAGGATGTAGAGGTTTTGTTCCAAGAGGGAGTGGGGCGTTGCCACTTTCTTGATAAGATGGCGTGTAAATTAGACTCCACCACAGCGATCCAGGTGAATAAGATGGTGGAAGGTGTTACGAATTTCATCGAGTCACTAACATGGTGA 432 0.4167 MKQKKVSAWTMKMLIDAVSSSGFSTVSNELAESSYDDLAISVDKEITSEMEVIAAVYHIFIKCCSVDKEMLVVIPEKDLLRDWGLEYCEALQKSGKDVEVLFQEGVGRCHFLDKMACKLDSTTAIQVNKMVEGVTNFIESLTW* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01220 143 Gene3D alpha/beta hydrolase 55 141 IPR029058 -
Pte15g01220 143 SUPERFAMILY alpha/beta-Hydrolases 65 116 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01220 Pte-Chr15 9310971 9311550 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01220 1 143 Mechanosensitive Ion Channel Family AT5G12080 35.948 1.86e-20 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01220 K22048 - csin:114265395 88.9669